RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	HFM1	P51979	1187 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	TOF1	P53840	1238 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	VPS38	Q05919	439 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	COG4	Q06096	861 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	ISA1	Q07821	250 aa	Predicted RBP	6.64	□□□□□ -1.35
WHI2	YOR043W	TCO89	Q08921	799 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	YPL277C	Q08989	487 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	HMI1	Q12039	706 aa		6.64	□□□□□ -1.35
WHI2	YOR043W	CFT2	Q12102	859 aa	Predicted RBP	6.64	□□□□□ -1.35
WHI2	YOR043W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.63	□□□□□ -1.35	not detected
WHI2	YOR043W	MAK16	P10962	306 aa	Predicted RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	SSA4	P22202	642 aa	Known RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	CDC60	P26637	1090 aa	Known RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	IXR1	P33417	597 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	PGM2	P37012	569 aa	Known RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	GPB2	P39717	880 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	UBP5	P39944	805 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	VFA1	P40080	203 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	FIS1	P40515	155 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	ZPR1	P53303	486 aa	Known RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	TUB4	P53378	473 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	UME1	Q03010	460 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	AGE1	Q04412	482 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	TYW1	Q08960	810 aa	Known RBP	6.63	□□□□□ -1.35
WHI2	YOR043W	MED1	Q12321	566 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	ERP3	Q12403	225 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	YOL098C	Q12496	1037 aa		6.63	□□□□□ -1.35
WHI2	YOR043W	CDC19	P00549	500 aa	Known RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	SSB1	P11484	613 aa	Known RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	SPO12	P17123	173 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	PET123	P17558	318 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	CDC48	P25694	835 aa	Known RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	REG2	P38232	338 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	ACO2	P39533	789 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	SSB2	P40150	613 aa	Known RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	ATG3	P40344	310 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	CCM1	P48237	864 aa	Predicted RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	UBP15	P50101	1230 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	YGR125W	P53273	1036 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	ALF1	P53904	254 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	NCS2	P53923	493 aa	Predicted RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	YAF9	P53930	226 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	ARK1	P53974	638 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	ERG5	P54781	538 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	HOS3	Q02959	697 aa	Known RBP	6.62	□□□□□ -1.35
WHI2	YOR043W	SLD5	Q03406	294 aa		6.62	□□□□□ -1.35
WHI2	YOR043W	PCK1	P10963	549 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	DBP5	P20449	482 aa	Known RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	TKL1	P23254	680 aa	Known RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	PKC1	P24583	1151 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	PDC6	P26263	563 aa	Known RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	APL1	P27351	700 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	EUG1	P32474	517 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	STO1	P34160	861 aa	Known RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	YEL1	P34225	687 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	ATG19	P35193	415 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	UBP13	P38187	747 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	CAJ1	P39101	391 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	SEC9	P40357	651 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	SHQ1	P40486	507 aa	Predicted RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	APT1	P49435	187 aa	Known RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	VID30	P53076	958 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	GIR2	Q03768	265 aa	Predicted RBP	6.61	□□□□□ -1.35
WHI2	YOR043W	PLP2	Q12017	286 aa		6.61	□□□□□ -1.35
WHI2	YOR043W	PPR1	P07272	904 aa	Predicted RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	MTF2	P10849	440 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	TCP1	P12612	559 aa	Known RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	XRS2	P33301	854 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	IES1	P43579	692 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	YGR035C	P53222	116 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	CAF130	P53280	1122 aa	Predicted RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	UTP5	Q04177	643 aa	Known RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	SEC8	P32855	1065 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	TVP38	P36164	337 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	ERC1	P38767	581 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	CCC2	P38995	1004 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	VPS53	P47061	822 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	VPS60	Q03390	229 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	RBA50	Q04418	439 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	DUS4	Q06063	367 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	NEW1	Q08972	1196 aa	Known RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	FAL1	Q12099	399 aa	Known RBP	6.6	□□□□□ -1.35
WHI2	YOR043W	YDR461C-A	Q2V2P7	80 aa		6.6	□□□□□ -1.35
WHI2	YOR043W	TOM1	Q03280	3268 aa		6.59	□□□□□ -1.35
WHI2	YOR043W	SWI6	P09959	803 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	HVG1	P0CE11	249 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	PHO8	P11491	566 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	SEC23	P15303	768 aa	Known RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	TUP1	P16649	713 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	UBC1	P21734	215 aa	Known RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	YSC83	P32792	385 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	SMC1	P32908	1225 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	NIP100	P33420	868 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	BSD2	P38356	321 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	SMC2	P38989	1170 aa	Known RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	HMF1	P40037	129 aa	Known RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	CUR1	Q06469	252 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	OPT2	Q06593	877 aa		6.59	□□□□□ -1.36
WHI2	YOR043W	NOC3	Q07896	663 aa	Predicted RBP	6.59	□□□□□ -1.36
WHI2	YOR043W	SFI1	Q12369	946 aa		6.59	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms