Protein–RNA interactions for Protein: P50101

UBP15, Ubiquitin carboxyl-terminal hydrolase 15, yeastyeast

Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP15P50101 YML009W-BYML009W-B 477 nt22.9■■□□□ 1.26
UBP15P50101 NSR1YGR159C 1245 nt22.55■■□□□ 1.2
UBP15P50101 NOP1YDL014W 984 nt22.4■■□□□ 1.18
UBP15P50101 YKL036CYKL036C 393 nt20.93■□□□□ 0.94
UBP15P50101 MDJ1YFL016C 1536 nt19.72■□□□□ 0.75
UBP15P50101 Q0297Q0297 156 nt19.72■□□□□ 0.75
UBP15P50101 YJL027CYJL027C 417 nt19.58■□□□□ 0.72
UBP15P50101 SRX1YKL086W 384 nt19.58■□□□□ 0.72
UBP15P50101 SCS3YGL126W 1143 nt19.18■□□□□ 0.66
UBP15P50101 YCR051WYCR051W 669 nt18.57■□□□□ 0.56
UBP15P50101 YOL085CYOL085C 342 nt18.13■□□□□ 0.49
UBP15P50101 PKP1YIL042C 1185 nt17.79■□□□□ 0.44
UBP15P50101 RPP1BYDL130W 321 nt17.68■□□□□ 0.42
UBP15P50101 DBP2YNL112W 1641 nt17.59■□□□□ 0.41
UBP15P50101 TRN1tP(UGG)A 72 nt17.53■□□□□ 0.4
UBP15P50101 SUF9tP(UGG)F 72 nt17.53■□□□□ 0.4
UBP15P50101 SUF8tP(UGG)H 72 nt17.53■□□□□ 0.4
UBP15P50101 tP(UGG)LtP(UGG)L 72 nt17.53■□□□□ 0.4
UBP15P50101 SUF7tP(UGG)M 72 nt17.53■□□□□ 0.4
UBP15P50101 tP(UGG)N1tP(UGG)N1 72 nt17.53■□□□□ 0.4
UBP15P50101 tP(UGG)N2tP(UGG)N2 72 nt17.53■□□□□ 0.4
UBP15P50101 tP(UGG)O1tP(UGG)O1 72 nt17.53■□□□□ 0.4
UBP15P50101 SUF11tP(UGG)O2 72 nt17.53■□□□□ 0.4
UBP15P50101 SCJ1YMR214W 1134 nt17.38■□□□□ 0.37
UBP15P50101 CCC1YLR220W 969 nt17.34■□□□□ 0.37
UBP15P50101 ATS1YAL020C 1002 nt17.25■□□□□ 0.35
UBP15P50101 PET122YER153C 765 nt16.85■□□□□ 0.29
UBP15P50101 YBR190WYBR190W 312 nt16.77■□□□□ 0.28
UBP15P50101 SCR1SCR1 522 nt16.75■□□□□ 0.27
UBP15P50101 tP(UGG)O3tP(UGG)O3 72 nt16.68■□□□□ 0.26
UBP15P50101 RVS167YDR388W 1449 nt16.59■□□□□ 0.25
UBP15P50101 RRN5YLR141W 1092 nt16.41■□□□□ 0.22
UBP15P50101 RTC3YHR087W 336 nt16.39■□□□□ 0.21
UBP15P50101 YDJ1YNL064C 1230 nt16.15■□□□□ 0.18
UBP15P50101 RSB1YOR049C 1065 nt16.13■□□□□ 0.17
UBP15P50101 YER088W-BYER088W-B 147 nt16.09■□□□□ 0.17
UBP15P50101 SHR5YOL110W 714 nt16.09■□□□□ 0.17
UBP15P50101 PST2YDR032C 597 nt15.94■□□□□ 0.14
UBP15P50101 GAR1YHR089C 618 nt15.72■□□□□ 0.11
UBP15P50101 DEP1YAL013W 1218 nt15.51■□□□□ 0.07
UBP15P50101 URN1YPR152C 1398 nt15.45■□□□□ 0.06
UBP15P50101 YKL097CYKL097C 411 nt15.43■□□□□ 0.06
UBP15P50101 YNL208WYNL208W 600 nt15.33■□□□□ 0.04
UBP15P50101 RPN10YHR200W 807 nt15.3■□□□□ 0.04
UBP15P50101 SHU1YHL006C 453 nt15.21■□□□□ 0.03
UBP15P50101 TIR1YER011W 765 nt15.19■□□□□ 0.02
UBP15P50101 OPI9YLR338W 858 nt15.19■□□□□ 0.02
UBP15P50101 SSA3YBL075C 1950 nt15.07■□□□□ 0
UBP15P50101 PUT4YOR348C 1884 nt15.01□□□□□ -0.01
UBP15P50101 SAH1YER043C 1350 nt15□□□□□ -0.01
UBP15P50101 SSA1YAL005C 1929 nt14.95□□□□□ -0.02
UBP15P50101 YAL037C-BYAL037C-B 975 nt14.87□□□□□ -0.03
UBP15P50101 ARE1YCR048W 1833 nt14.82□□□□□ -0.04
UBP15P50101 YJR018WYJR018W 363 nt14.77□□□□□ -0.05
UBP15P50101 YOR139CYOR139C 393 nt14.77□□□□□ -0.05
UBP15P50101 SRB2YHR041C 633 nt14.75□□□□□ -0.05
UBP15P50101 PUN1YLR414C 792 nt14.75□□□□□ -0.05
UBP15P50101 YHR049C-AYHR049C-A 297 nt14.61□□□□□ -0.07
UBP15P50101 YJR120WYJR120W 351 nt14.61□□□□□ -0.07
UBP15P50101 NPL3YDR432W 1245 nt14.57□□□□□ -0.08
UBP15P50101 YGR021WYGR021W 873 nt14.57□□□□□ -0.08
UBP15P50101 WWM1YFL010C 636 nt14.56□□□□□ -0.08
UBP15P50101 POA1YBR022W 534 nt14.55□□□□□ -0.08
UBP15P50101 RPP2BYDR382W 333 nt14.54□□□□□ -0.08
UBP15P50101 HOM6YJR139C 1080 nt14.54□□□□□ -0.08
UBP15P50101 PTC2YER089C 1395 nt14.51□□□□□ -0.09
UBP15P50101 MNP1YGL068W 585 nt14.49□□□□□ -0.09
UBP15P50101 YOL037CYOL037C 354 nt14.38□□□□□ -0.11
UBP15P50101 YFL021C-AYFL021C-A 855 nt14.34□□□□□ -0.11
UBP15P50101 RKM5YLR137W 1104 nt14.32□□□□□ -0.12
UBP15P50101 BDH2YAL061W 1254 nt14.31□□□□□ -0.12
UBP15P50101 BUD23YCR047C 828 nt14.29□□□□□ -0.12
UBP15P50101 NAB2YGL122C 1578 nt14.29□□□□□ -0.12
UBP15P50101 INM2YDR287W 879 nt14.23□□□□□ -0.13
UBP15P50101 tM(CAU)CtM(CAU)C 72 nt14.2□□□□□ -0.14
UBP15P50101 IMT4tM(CAU)E 72 nt14.2□□□□□ -0.14
UBP15P50101 IMT3tM(CAU)J3 72 nt14.2□□□□□ -0.14
UBP15P50101 IMT1tM(CAU)O1 72 nt14.2□□□□□ -0.14
UBP15P50101 IMT2tM(CAU)P 72 nt14.2□□□□□ -0.14
UBP15P50101 LSM3YLR438C-A 270 nt14.2□□□□□ -0.14
UBP15P50101 BSC6YOL137W 1494 nt14.18□□□□□ -0.14
UBP15P50101 DAL1YIR027C 1383 nt14.15□□□□□ -0.14
UBP15P50101 FIS1YIL065C 468 nt14.1□□□□□ -0.15
UBP15P50101 FPR4YLR449W 1179 nt14.1□□□□□ -0.15
UBP15P50101 YBL100CYBL100C 315 nt14.1□□□□□ -0.15
UBP15P50101 YLR281CYLR281C 468 nt14.03□□□□□ -0.16
UBP15P50101 PHO4YFR034C 939 nt14.01□□□□□ -0.17
UBP15P50101 TRM9YML014W 840 nt13.99□□□□□ -0.17
UBP15P50101 PUS2YGL063W 1113 nt13.98□□□□□ -0.17
UBP15P50101 FUN26YAL022C 1554 nt13.96□□□□□ -0.17
UBP15P50101 WHI5YOR083W 888 nt13.94□□□□□ -0.18
UBP15P50101 CCT6YDR188W 1641 nt13.84□□□□□ -0.19
UBP15P50101 MOT3YMR070W 1473 nt13.73□□□□□ -0.21
UBP15P50101 YLR154C-GYLR154C-G 150 nt13.71□□□□□ -0.21
UBP15P50101 SUF2tP(AGG)C 72 nt13.69□□□□□ -0.22
UBP15P50101 SUF10tP(AGG)N 72 nt13.69□□□□□ -0.22
UBP15P50101 ALF1YNL148C 765 nt13.69□□□□□ -0.22
UBP15P50101 DSK2YMR276W 1122 nt13.67□□□□□ -0.22
UBP15P50101 YPR011CYPR011C 981 nt13.67□□□□□ -0.22
UBP15P50101 IMP2'YIL154C 1041 nt13.65□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms