Protein–RNA interactions for Protein: P53974

ARK1, Actin-regulating kinase 1, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ARK1P53974 YML009W-BYML009W-B 477 nt22.56■■□□□ 1.2
ARK1P53974 NSR1YGR159C 1245 nt22.29■■□□□ 1.16
ARK1P53974 NOP1YDL014W 984 nt21.86■■□□□ 1.09
ARK1P53974 YKL036CYKL036C 393 nt20.3■□□□□ 0.84
ARK1P53974 MDJ1YFL016C 1536 nt19.83■□□□□ 0.77
ARK1P53974 Q0297Q0297 156 nt19.22■□□□□ 0.67
ARK1P53974 SRX1YKL086W 384 nt19.15■□□□□ 0.66
ARK1P53974 YJL027CYJL027C 417 nt18.98■□□□□ 0.63
ARK1P53974 SCS3YGL126W 1143 nt18.57■□□□□ 0.56
ARK1P53974 YCR051WYCR051W 669 nt18.21■□□□□ 0.51
ARK1P53974 YOL085CYOL085C 342 nt17.64■□□□□ 0.41
ARK1P53974 DBP2YNL112W 1641 nt17.59■□□□□ 0.41
ARK1P53974 PKP1YIL042C 1185 nt17.43■□□□□ 0.38
ARK1P53974 TRN1tP(UGG)A 72 nt17.29■□□□□ 0.36
ARK1P53974 SUF9tP(UGG)F 72 nt17.29■□□□□ 0.36
ARK1P53974 SUF8tP(UGG)H 72 nt17.29■□□□□ 0.36
ARK1P53974 tP(UGG)LtP(UGG)L 72 nt17.29■□□□□ 0.36
ARK1P53974 SUF7tP(UGG)M 72 nt17.29■□□□□ 0.36
ARK1P53974 tP(UGG)N1tP(UGG)N1 72 nt17.29■□□□□ 0.36
ARK1P53974 tP(UGG)N2tP(UGG)N2 72 nt17.29■□□□□ 0.36
ARK1P53974 tP(UGG)O1tP(UGG)O1 72 nt17.29■□□□□ 0.36
ARK1P53974 SUF11tP(UGG)O2 72 nt17.29■□□□□ 0.36
ARK1P53974 RPP1BYDL130W 321 nt17.25■□□□□ 0.35
ARK1P53974 CCC1YLR220W 969 nt17.18■□□□□ 0.34
ARK1P53974 YBR190WYBR190W 312 nt16.79■□□□□ 0.28
ARK1P53974 ATS1YAL020C 1002 nt16.62■□□□□ 0.25
ARK1P53974 PET122YER153C 765 nt16.53■□□□□ 0.24
ARK1P53974 SCJ1YMR214W 1134 nt16.5■□□□□ 0.23
ARK1P53974 RTC3YHR087W 336 nt16.46■□□□□ 0.23
ARK1P53974 RVS167YDR388W 1449 nt16.4■□□□□ 0.22
ARK1P53974 tP(UGG)O3tP(UGG)O3 72 nt16.4■□□□□ 0.22
ARK1P53974 SCR1SCR1 522 nt16.26■□□□□ 0.19
ARK1P53974 RRN5YLR141W 1092 nt16.06■□□□□ 0.16
ARK1P53974 SHR5YOL110W 714 nt15.9■□□□□ 0.14
ARK1P53974 YDJ1YNL064C 1230 nt15.82■□□□□ 0.12
ARK1P53974 YER088W-BYER088W-B 147 nt15.75■□□□□ 0.11
ARK1P53974 RSB1YOR049C 1065 nt15.72■□□□□ 0.11
ARK1P53974 GAR1YHR089C 618 nt15.52■□□□□ 0.08
ARK1P53974 DEP1YAL013W 1218 nt15.52■□□□□ 0.08
ARK1P53974 URN1YPR152C 1398 nt15.44■□□□□ 0.06
ARK1P53974 PST2YDR032C 597 nt15.39■□□□□ 0.05
ARK1P53974 PUT4YOR348C 1884 nt15.25■□□□□ 0.03
ARK1P53974 YNL208WYNL208W 600 nt15.19■□□□□ 0.02
ARK1P53974 OPI9YLR338W 858 nt15.17■□□□□ 0.02
ARK1P53974 SAH1YER043C 1350 nt15.12■□□□□ 0.01
ARK1P53974 RPN10YHR200W 807 nt15.12■□□□□ 0.01
ARK1P53974 ARE1YCR048W 1833 nt15.01□□□□□ -0.01
ARK1P53974 TIR1YER011W 765 nt14.97□□□□□ -0.01
ARK1P53974 SSA1YAL005C 1929 nt14.83□□□□□ -0.04
ARK1P53974 YHR049C-AYHR049C-A 297 nt14.8□□□□□ -0.04
ARK1P53974 POA1YBR022W 534 nt14.8□□□□□ -0.04
ARK1P53974 SHU1YHL006C 453 nt14.78□□□□□ -0.04
ARK1P53974 YKL097CYKL097C 411 nt14.78□□□□□ -0.04
ARK1P53974 YJR018WYJR018W 363 nt14.72□□□□□ -0.05
ARK1P53974 SRB2YHR041C 633 nt14.7□□□□□ -0.06
ARK1P53974 PUN1YLR414C 792 nt14.7□□□□□ -0.06
ARK1P53974 YJR120WYJR120W 351 nt14.62□□□□□ -0.07
ARK1P53974 PTC2YER089C 1395 nt14.59□□□□□ -0.07
ARK1P53974 YAL037C-BYAL037C-B 975 nt14.58□□□□□ -0.08
ARK1P53974 BUD23YCR047C 828 nt14.46□□□□□ -0.09
ARK1P53974 BSC6YOL137W 1494 nt14.45□□□□□ -0.1
ARK1P53974 RPP2BYDR382W 333 nt14.38□□□□□ -0.11
ARK1P53974 WWM1YFL010C 636 nt14.38□□□□□ -0.11
ARK1P53974 NAB2YGL122C 1578 nt14.32□□□□□ -0.12
ARK1P53974 YOR139CYOR139C 393 nt14.27□□□□□ -0.13
ARK1P53974 MNP1YGL068W 585 nt14.23□□□□□ -0.13
ARK1P53974 HOM6YJR139C 1080 nt14.23□□□□□ -0.13
ARK1P53974 SSA3YBL075C 1950 nt14.23□□□□□ -0.13
ARK1P53974 FIS1YIL065C 468 nt14.2□□□□□ -0.14
ARK1P53974 YGR021WYGR021W 873 nt14.19□□□□□ -0.14
ARK1P53974 FPR4YLR449W 1179 nt14.18□□□□□ -0.14
ARK1P53974 DAL1YIR027C 1383 nt14.16□□□□□ -0.14
ARK1P53974 BDH2YAL061W 1254 nt14.15□□□□□ -0.14
ARK1P53974 INM2YDR287W 879 nt14.14□□□□□ -0.15
ARK1P53974 PHO4YFR034C 939 nt14.06□□□□□ -0.16
ARK1P53974 YBL100CYBL100C 315 nt14.06□□□□□ -0.16
ARK1P53974 YFL021C-AYFL021C-A 855 nt14.05□□□□□ -0.16
ARK1P53974 NPL3YDR432W 1245 nt14.03□□□□□ -0.16
ARK1P53974 RKM5YLR137W 1104 nt14.02□□□□□ -0.17
ARK1P53974 LSM3YLR438C-A 270 nt13.96□□□□□ -0.17
ARK1P53974 FUN26YAL022C 1554 nt13.92□□□□□ -0.18
ARK1P53974 YOL037CYOL037C 354 nt13.9□□□□□ -0.18
ARK1P53974 TRM9YML014W 840 nt13.86□□□□□ -0.19
ARK1P53974 YPS1YLR120C 1710 nt13.75□□□□□ -0.21
ARK1P53974 SPT5YML010W 3192 nt13.73□□□□□ -0.21
ARK1P53974 CCT6YDR188W 1641 nt13.72□□□□□ -0.21
ARK1P53974 tM(CAU)CtM(CAU)C 72 nt13.68□□□□□ -0.22
ARK1P53974 IMT4tM(CAU)E 72 nt13.68□□□□□ -0.22
ARK1P53974 IMT3tM(CAU)J3 72 nt13.68□□□□□ -0.22
ARK1P53974 IMT1tM(CAU)O1 72 nt13.68□□□□□ -0.22
ARK1P53974 IMT2tM(CAU)P 72 nt13.68□□□□□ -0.22
ARK1P53974 YDR095CYDR095C 411 nt13.67□□□□□ -0.22
ARK1P53974 YLR281CYLR281C 468 nt13.65□□□□□ -0.22
ARK1P53974 ALF1YNL148C 765 nt13.65□□□□□ -0.22
ARK1P53974 WHI5YOR083W 888 nt13.6□□□□□ -0.23
ARK1P53974 YHR165W-AYHR165W-A 312 nt13.58□□□□□ -0.24
ARK1P53974 PUS2YGL063W 1113 nt13.55□□□□□ -0.24
ARK1P53974 SUF2tP(AGG)C 72 nt13.54□□□□□ -0.24
ARK1P53974 SUF10tP(AGG)N 72 nt13.54□□□□□ -0.24
ARK1P53974 MEP2YNL142W 1500 nt13.53□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms