RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	HFM1	P51979	1187 aa		13.52	□□□□□ -0.25
SIS1	YNL007C	MED1	Q12321	566 aa		13.52	□□□□□ -0.25
SIS1	YNL007C	TRK2	P28584	889 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	PGM2	P37012	569 aa	Known RBP	13.51	□□□□□ -0.25
SIS1	YNL007C	REG2	P38232	338 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	MXR1	P40029	184 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	VFA1	P40080	203 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	UBP15	P50101	1230 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	YGR125W	P53273	1036 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	NCS2	P53923	493 aa	Predicted RBP	13.51	□□□□□ -0.25
SIS1	YNL007C	UME1	Q03010	460 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	ERP3	Q12403	225 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	YOL098C	Q12496	1037 aa		13.51	□□□□□ -0.25
SIS1	YNL007C	VPS13	Q07878	3144 aa		13.5	□□□□□ -0.25
SIS1	YNL007C	SSB1	P11484	613 aa	Known RBP	13.5	□□□□□ -0.25
SIS1	YNL007C	PET123	P17558	318 aa		13.5	□□□□□ -0.25
SIS1	YNL007C	TKL1	P23254	680 aa	Known RBP	13.5	□□□□□ -0.25
SIS1	YNL007C	CDC48	P25694	835 aa	Known RBP	13.5	□□□□□ -0.25
SIS1	YNL007C	SSB2	P40150	613 aa	Known RBP	13.5	□□□□□ -0.25
SIS1	YNL007C	CCM1	P48237	864 aa	Predicted RBP	13.5	□□□□□ -0.25
SIS1	YNL007C	SLD5	Q03406	294 aa		13.5	□□□□□ -0.25
SIS1	YNL007C	PLP2	Q12017	286 aa		13.5	□□□□□ -0.25
SIS1	YNL007C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.49	□□□□□ -0.25	not detected
SIS1	YNL007C	PCK1	P10963	549 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	SPO12	P17123	173 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.49	□□□□□ -0.25	not detected
SIS1	YNL007C	APL1	P27351	700 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	UBP13	P38187	747 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	UBP5	P39944	805 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	ATG3	P40344	310 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	VID30	P53076	958 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	BRE5	P53741	515 aa	Known RBP	13.49	□□□□□ -0.25
SIS1	YNL007C	ALF1	P53904	254 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	HOS3	Q02959	697 aa	Known RBP	13.49	□□□□□ -0.25
SIS1	YNL007C	MET7	Q08645	548 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	SUT2	Q12286	268 aa		13.49	□□□□□ -0.25
SIS1	YNL007C	TCP1	P12612	559 aa	Known RBP	13.48	□□□□□ -0.25
SIS1	YNL007C	DBP5	P20449	482 aa	Known RBP	13.48	□□□□□ -0.25
SIS1	YNL007C	ATG19	P35193	415 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	CAJ1	P39101	391 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	FIR1	P40020	876 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	YAP5	P40574	245 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	APT1	P49435	187 aa	Known RBP	13.48	□□□□□ -0.25
SIS1	YNL007C	ARK1	P53974	638 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	GIR2	Q03768	265 aa	Predicted RBP	13.48	□□□□□ -0.25
SIS1	YNL007C	ECM30	Q06673	1274 aa		13.48	□□□□□ -0.25
SIS1	YNL007C	YEL1	P34225	687 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	UIP5	P36137	443 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	YJR107W	P47145	328 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	ERG5	P54781	538 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	YPL034W	Q03083	165 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	MAM3	Q12296	706 aa		13.47	□□□□□ -0.25
SIS1	YNL007C	MTF2	P10849	440 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	PHO8	P11491	566 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	SEC8	P32855	1065 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	XRS2	P33301	854 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	STO1	P34160	861 aa	Known RBP	13.46	□□□□□ -0.25
SIS1	YNL007C	VPS29	P38759	282 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	HMF1	P40037	129 aa	Known RBP	13.46	□□□□□ -0.25
SIS1	YNL007C	SHQ1	P40486	507 aa	Predicted RBP	13.46	□□□□□ -0.25
SIS1	YNL007C	PRY3	P47033	881 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	CAF130	P53280	1122 aa	Predicted RBP	13.46	□□□□□ -0.25
SIS1	YNL007C	UTP5	Q04177	643 aa	Known RBP	13.46	□□□□□ -0.25
SIS1	YNL007C	DUS4	Q06063	367 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	NCR1	Q12200	1170 aa		13.46	□□□□□ -0.25
SIS1	YNL007C	PPR1	P07272	904 aa	Predicted RBP	13.45	□□□□□ -0.26
SIS1	YNL007C	PDC6	P26263	563 aa	Known RBP	13.45	□□□□□ -0.26
SIS1	YNL007C	TVP38	P36164	337 aa		13.45	□□□□□ -0.26
SIS1	YNL007C	SMC2	P38989	1170 aa	Known RBP	13.45	□□□□□ -0.26
SIS1	YNL007C	SEC9	P40357	651 aa		13.45	□□□□□ -0.26
SIS1	YNL007C	AIM21	P40563	679 aa		13.45	□□□□□ -0.26
SIS1	YNL007C	IES1	P43579	692 aa		13.45	□□□□□ -0.26
SIS1	YNL007C	CUR1	Q06469	252 aa		13.45	□□□□□ -0.26
SIS1	YNL007C	NEW1	Q08972	1196 aa	Known RBP	13.45	□□□□□ -0.26
SIS1	YNL007C	SWI6	P09959	803 aa		13.44	□□□□□ -0.26
SIS1	YNL007C	NIP100	P33420	868 aa		13.44	□□□□□ -0.26
SIS1	YNL007C	WHI3	P34761	661 aa	Known RBP	13.44	□□□□□ -0.26
SIS1	YNL007C	VPS53	P47061	822 aa		13.44	□□□□□ -0.26
SIS1	YNL007C	EAR1	Q03212	550 aa		13.44	□□□□□ -0.26
SIS1	YNL007C	VPS60	Q03390	229 aa		13.44	□□□□□ -0.26
SIS1	YNL007C	NOC3	Q07896	663 aa	Predicted RBP	13.44	□□□□□ -0.26
SIS1	YNL007C	FAL1	Q12099	399 aa	Known RBP	13.44	□□□□□ -0.26
SIS1	YNL007C	MDM20	Q12387	796 aa	Known RBP	13.44	□□□□□ -0.26
SIS1	YNL007C	NOP58	Q12499	511 aa	Known RBP	13.44	□□□□□ -0.26
SIS1	YNL007C	SEC23	P15303	768 aa	Known RBP	13.43	□□□□□ -0.26
SIS1	YNL007C	YSC83	P32792	385 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	SMC1	P32908	1225 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	TFC4	P33339	1025 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	ECM29	P38737	1868 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	ERC1	P38767	581 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	AFG3	P39925	761 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	CEP3	P40969	608 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	YFL040W	P43562	540 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	OPY2	Q06810	360 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	MLH2	Q07980	695 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	SMC5	Q08204	1093 aa		13.43	□□□□□ -0.26
SIS1	YNL007C	CHS2	P14180	963 aa		13.42	□□□□□ -0.26
SIS1	YNL007C	UBC1	P21734	215 aa	Known RBP	13.42	□□□□□ -0.26
SIS1	YNL007C	KTR2	P33550	425 aa		13.42	□□□□□ -0.26
SIS1	YNL007C	CCC2	P38995	1004 aa		13.42	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms