RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W BIM1P40013 344 aa13.04□□□□□ -0.32
CUE1YMR264W SEC9P40357 651 aa13.04□□□□□ -0.32
CUE1YMR264W HUL4P40985 892 aa13.04□□□□□ -0.32
CUE1YMR264W BRE2P43132 505 aa13.04□□□□□ -0.32
CUE1YMR264W PHR1P05066 565 aaKnown RBP RIP-Chip data13.03□□□□□ -0.32not detected
CUE1YMR264W SPO12P17123 173 aa13.03□□□□□ -0.32
CUE1YMR264W TCD1P38756 429 aa13.03□□□□□ -0.32
CUE1YMR264W VHR2P40041 505 aa13.03□□□□□ -0.32
CUE1YMR264W SHQ1P40486 507 aaPredicted RBP13.03□□□□□ -0.32
CUE1YMR264W YFL034WP43564 1073 aa13.03□□□□□ -0.32
CUE1YMR264W LIF1P53150 421 aa13.03□□□□□ -0.32
CUE1YMR264W SEC5P89102 971 aa13.03□□□□□ -0.32
CUE1YMR264W PGM1P33401 570 aaKnown RBP13.02□□□□□ -0.33
CUE1YMR264W CCC2P38995 1004 aa13.02□□□□□ -0.33
CUE1YMR264W CNM67P53865 581 aaKnown RBP13.02□□□□□ -0.33
CUE1YMR264W UTP5Q04177 643 aaKnown RBP13.02□□□□□ -0.33
CUE1YMR264W TCO89Q08921 799 aa13.02□□□□□ -0.33
CUE1YMR264W NEW1Q08972 1196 aaKnown RBP13.02□□□□□ -0.33
CUE1YMR264W PLP2Q12017 286 aa13.02□□□□□ -0.33
CUE1YMR264W MCM16Q12262 181 aa13.02□□□□□ -0.33
CUE1YMR264W NBP1P52919 319 aaPredicted RBP13.01□□□□□ -0.33
CUE1YMR264W DIP5P53388 608 aa13.01□□□□□ -0.33
CUE1YMR264W TMA64Q04600 565 aaKnown RBP13.01□□□□□ -0.33
CUE1YMR264W YDL057WQ07379 328 aa13.01□□□□□ -0.33
CUE1YMR264W WHI4Q07655 649 aaKnown RBP13.01□□□□□ -0.33
CUE1YMR264W RKM4Q12504 494 aa13.01□□□□□ -0.33
CUE1YMR264W SRD1P09007 221 aa13□□□□□ -0.33
CUE1YMR264W SSB1P11484 613 aaKnown RBP13□□□□□ -0.33
CUE1YMR264W CDC60P26637 1090 aaKnown RBP13□□□□□ -0.33
CUE1YMR264W TGL1P34163 548 aa13□□□□□ -0.33
CUE1YMR264W MCX1P38323 520 aaPredicted RBP13□□□□□ -0.33
CUE1YMR264W SSB2P40150 613 aaKnown RBP13□□□□□ -0.33
CUE1YMR264W NDC80P40460 691 aa13□□□□□ -0.33
CUE1YMR264W YAP5P40574 245 aa13□□□□□ -0.33
CUE1YMR264W GPD2P41911 440 aaKnown RBP13□□□□□ -0.33
CUE1YMR264W GIN4Q12263 1142 aa13□□□□□ -0.33
CUE1YMR264W PPR1P07272 904 aaPredicted RBP12.99□□□□□ -0.33
CUE1YMR264W SAM1P10659 382 aaKnown RBP12.99□□□□□ -0.33
CUE1YMR264W SUP45P12385 437 aaKnown RBP12.99□□□□□ -0.33
CUE1YMR264W CLN3P13365 580 aa12.99□□□□□ -0.33
CUE1YMR264W ESS1P22696 170 aa12.99□□□□□ -0.33
CUE1YMR264W APL1P27351 700 aa12.99□□□□□ -0.33
CUE1YMR264W ULP2P40537 1034 aaPredicted RBP12.99□□□□□ -0.33
CUE1YMR264W IES1P43579 692 aa12.99□□□□□ -0.33
CUE1YMR264W ALD6P54115 500 aaKnown RBP12.99□□□□□ -0.33
CUE1YMR264W SML1Q04964 104 aa12.99□□□□□ -0.33
CUE1YMR264W MED1Q12321 566 aa12.99□□□□□ -0.33
CUE1YMR264W FBP1P09201 348 aa12.98□□□□□ -0.33
CUE1YMR264W STE11P23561 717 aa12.98□□□□□ -0.33
CUE1YMR264W PER1P25625 357 aa12.98□□□□□ -0.33
CUE1YMR264W PDC6P26263 563 aaKnown RBP12.98□□□□□ -0.33
CUE1YMR264W MRF1P30775 413 aaPredicted RBP12.98□□□□□ -0.33
CUE1YMR264W OCT1P35999 772 aa12.98□□□□□ -0.33
CUE1YMR264W UBP11P36026 717 aa12.98□□□□□ -0.33
CUE1YMR264W SMC2P38989 1170 aaKnown RBP12.98□□□□□ -0.33
CUE1YMR264W UBP5P39944 805 aa12.98□□□□□ -0.33
CUE1YMR264W VAC14Q06708 880 aa12.98□□□□□ -0.33
CUE1YMR264W GUD1Q07729 489 aa12.98□□□□□ -0.33
CUE1YMR264W YPL277CQ08989 487 aa12.98□□□□□ -0.33
CUE1YMR264W PGK1P00560 416 aaKnown RBP12.97□□□□□ -0.33
CUE1YMR264W DAL7P21826 554 aa12.97□□□□□ -0.33
CUE1YMR264W PRP22P24384 1145 aaKnown RBP12.97□□□□□ -0.33
CUE1YMR264W TRK2P28584 889 aa12.97□□□□□ -0.33
CUE1YMR264W SUV3P32580 737 aa12.97□□□□□ -0.33
CUE1YMR264W EFM4P40516 257 aa12.97□□□□□ -0.33
CUE1YMR264W PRP31P49704 494 aaPredicted RBP12.97□□□□□ -0.33
CUE1YMR264W PEX29Q03370 554 aa12.97□□□□□ -0.33
CUE1YMR264W SPH1Q06160 661 aa12.97□□□□□ -0.33
CUE1YMR264W YLR326WQ06170 240 aaKnown RBP12.97□□□□□ -0.33
CUE1YMR264W UBX5Q06682 500 aa12.97□□□□□ -0.33
CUE1YMR264W OPY2Q06810 360 aa12.97□□□□□ -0.33
CUE1YMR264W RAD57P25301 460 aa12.96□□□□□ -0.33
CUE1YMR264W DPB3P27344 201 aa12.96□□□□□ -0.33
CUE1YMR264W LTV1P34078 463 aa12.96□□□□□ -0.33
CUE1YMR264W REI1P38344 393 aaPredicted RBP12.96□□□□□ -0.33
CUE1YMR264W RPN3P40016 523 aaKnown RBP12.96□□□□□ -0.33
CUE1YMR264W YJL007CP47080 104 aa12.96□□□□□ -0.33
CUE1YMR264W TOF1P53840 1238 aa12.96□□□□□ -0.33
CUE1YMR264W BOP3P53958 396 aa12.96□□□□□ -0.33
CUE1YMR264W PHM6Q05637 104 aa12.96□□□□□ -0.33
CUE1YMR264W TOM70P07213 617 aaKnown RBP12.95□□□□□ -0.34
CUE1YMR264W PCK1P10963 549 aa12.95□□□□□ -0.34
CUE1YMR264W XRS2P33301 854 aa12.95□□□□□ -0.34
CUE1YMR264W RBA50Q04418 439 aa12.95□□□□□ -0.34
CUE1YMR264W NOP14Q99207 810 aaKnown RBP12.95□□□□□ -0.34
CUE1YMR264W SCP160P06105 1222 aaKnown RBP RIP-Chip data12.94□□□□□ -0.34not detected
CUE1YMR264W TUP1P16649 713 aa12.94□□□□□ -0.34
CUE1YMR264W CLB5P30283 435 aa12.94□□□□□ -0.34
CUE1YMR264W SRB4P32569 687 aa12.94□□□□□ -0.34
CUE1YMR264W NIP100P33420 868 aa12.94□□□□□ -0.34
CUE1YMR264W PEA2P40091 420 aa12.94□□□□□ -0.34
CUE1YMR264W FIS1P40515 155 aa12.94□□□□□ -0.34
CUE1YMR264W SMC3P47037 1230 aa12.94□□□□□ -0.34
CUE1YMR264W CCM1P48237 864 aaPredicted RBP12.94□□□□□ -0.34
CUE1YMR264W VID30P53076 958 aa12.94□□□□□ -0.34
CUE1YMR264W PTA1Q01329 785 aaPredicted RBP12.94□□□□□ -0.34
CUE1YMR264W GIR2Q03768 265 aaPredicted RBP12.94□□□□□ -0.34
CUE1YMR264W YPR078CQ06813 372 aa12.94□□□□□ -0.34
CUE1YMR264W YDJ1P25491 409 aaKnown RBP12.93□□□□□ -0.34
CUE1YMR264W YEL043WP32618 956 aa12.93□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms