RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YKL068W-AQ3E826 78 aa6.14□□□□□ -1.43
PDH1YPR002W DAT1P13483 248 aaKnown RBP6.14□□□□□ -1.43
PDH1YPR002W CDC15P27636 974 aa6.14□□□□□ -1.43
PDH1YPR002W URA1P28272 314 aaPredicted RBP6.14□□□□□ -1.43
PDH1YPR002W YKL133CP36066 463 aa6.14□□□□□ -1.43
PDH1YPR002W CRG1P38892 291 aaRIP-Chip data6.14□□□□□ -1.43not detected
PDH1YPR002W PKH1Q03407 766 aa6.14□□□□□ -1.43
PDH1YPR002W ESF1Q06344 628 aaKnown RBP6.14□□□□□ -1.43
PDH1YPR002W YCG1Q06680 1035 aa6.14□□□□□ -1.43
PDH1YPR002W BDS1Q08347 646 aa6.14□□□□□ -1.43
PDH1YPR002W SSF2Q12153 453 aaPredicted RBP6.14□□□□□ -1.43
PDH1YPR002W TAH18Q12181 623 aa6.14□□□□□ -1.43
PDH1YPR002W HSP82P02829 709 aaKnown RBP6.13□□□□□ -1.43
PDH1YPR002W HXK1P04806 485 aaKnown RBP6.13□□□□□ -1.43
PDH1YPR002W UBC1P21734 215 aaKnown RBP6.13□□□□□ -1.43
PDH1YPR002W MET1P36150 593 aa6.13□□□□□ -1.43
PDH1YPR002W TBS1P38114 1094 aa6.13□□□□□ -1.43
PDH1YPR002W ALF1P53904 254 aa6.13□□□□□ -1.43
PDH1YPR002W YOL087CQ99247 1116 aa6.13□□□□□ -1.43
PDH1YPR002W POM152P39685 1337 aa6.12□□□□□ -1.43
PDH1YPR002W RGP1P16664 663 aa6.12□□□□□ -1.43
PDH1YPR002W PET123P17558 318 aa6.12□□□□□ -1.43
PDH1YPR002W VAN1P23642 535 aa6.12□□□□□ -1.43
PDH1YPR002W GLO3P38682 493 aaKnown RBP6.12□□□□□ -1.43
PDH1YPR002W OSW7P43611 510 aa6.12□□□□□ -1.43
PDH1YPR002W HST3P53687 447 aa6.12□□□□□ -1.43
PDH1YPR002W FAR11P53917 953 aa6.12□□□□□ -1.43
PDH1YPR002W SPN1Q06505 410 aaPredicted RBP6.12□□□□□ -1.43
PDH1YPR002W PPM2Q08282 695 aa6.12□□□□□ -1.43
PDH1YPR002W SNU66Q12420 587 aaPredicted RBP6.12□□□□□ -1.43
PDH1YPR002W RPS6AP0CX37 236 aaKnown RBP6.11□□□□□ -1.43
PDH1YPR002W RPS6BP0CX38 236 aaPredicted RBP6.11□□□□□ -1.43
PDH1YPR002W AFT1P22149 690 aa6.11□□□□□ -1.43
PDH1YPR002W DEP1P31385 405 aa6.11□□□□□ -1.43
PDH1YPR002W RRP1P35178 278 aaPredicted RBP6.11□□□□□ -1.43
PDH1YPR002W RER2P35196 286 aa6.11□□□□□ -1.43
PDH1YPR002W RPN10P38886 268 aaKnown RBP6.11□□□□□ -1.43
PDH1YPR002W YGL140CP53120 1219 aa6.11□□□□□ -1.43
PDH1YPR002W CAF130P53280 1122 aaPredicted RBP6.11□□□□□ -1.43
PDH1YPR002W MAL13P53338 473 aa6.11□□□□□ -1.43
PDH1YPR002W GYL1Q04322 720 aa6.11□□□□□ -1.43
PDH1YPR002W EST2Q06163 884 aa6.11□□□□□ -1.43
PDH1YPR002W TLG2Q08144 397 aa6.11□□□□□ -1.43
PDH1YPR002W FIG2P25653 1609 aa6.11□□□□□ -1.43
PDH1YPR002W SWI5P08153 709 aa6.1□□□□□ -1.43
PDH1YPR002W CDC6P09119 513 aa6.1□□□□□ -1.43
PDH1YPR002W PFK2P16862 959 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
PDH1YPR002W MCM3P24279 971 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W SWI4P25302 1093 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W DPB3P27344 201 aa6.1□□□□□ -1.43
PDH1YPR002W ASH1P34233 588 aa6.1□□□□□ -1.43
PDH1YPR002W SHM1P37292 490 aaPredicted RBP6.1□□□□□ -1.43
PDH1YPR002W ADE17P38009 592 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W MED8P38304 223 aa6.1□□□□□ -1.43
PDH1YPR002W VPS41P38959 992 aa6.1□□□□□ -1.43
PDH1YPR002W AKR1P39010 764 aa6.1□□□□□ -1.43
PDH1YPR002W BRE2P43132 505 aa6.1□□□□□ -1.43
PDH1YPR002W APT1P49435 187 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W BOP3P53958 396 aa6.1□□□□□ -1.43
PDH1YPR002W RNT1Q02555 471 aa6.1□□□□□ -1.43
PDH1YPR002W YMR102CQ03177 834 aa6.1□□□□□ -1.43
PDH1YPR002W WTM2Q12206 467 aa6.1□□□□□ -1.43
PDH1YPR002W CYT1P07143 309 aa6.1□□□□□ -1.43
PDH1YPR002W PIF1P07271 859 aa6.1□□□□□ -1.43
PDH1YPR002W VPS1P21576 704 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W CLB1P24868 471 aa6.1□□□□□ -1.43
PDH1YPR002W STO1P34160 861 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W BMH2P34730 273 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W RTT107P38850 1070 aa6.1□□□□□ -1.43
PDH1YPR002W ECM1P39715 212 aa6.1□□□□□ -1.43
PDH1YPR002W DLD3P39976 496 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W CTK3P46963 296 aaPredicted RBP6.1□□□□□ -1.43
PDH1YPR002W YML020WQ03722 664 aa6.1□□□□□ -1.43
PDH1YPR002W CWC15Q03772 175 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W GET3Q12154 354 aaKnown RBP6.1□□□□□ -1.43
PDH1YPR002W SEC23P15303 768 aaKnown RBP6.09□□□□□ -1.43
PDH1YPR002W UBP1P25037 809 aa6.09□□□□□ -1.43
PDH1YPR002W GRX1P25373 110 aaKnown RBP6.09□□□□□ -1.43
PDH1YPR002W BMH1P29311 267 aaKnown RBP6.09□□□□□ -1.43
PDH1YPR002W YEL043WP32618 956 aa6.09□□□□□ -1.43
PDH1YPR002W BUD16P39988 312 aa6.09□□□□□ -1.43
PDH1YPR002W SEC9P40357 651 aa6.09□□□□□ -1.43
PDH1YPR002W ALD2P47771 506 aa6.09□□□□□ -1.43
PDH1YPR002W RRB1Q04225 511 aaKnown RBP6.09□□□□□ -1.43
PDH1YPR002W GFD1Q04839 188 aaKnown RBP6.09□□□□□ -1.43
PDH1YPR002W VPS38Q05919 439 aa6.09□□□□□ -1.43
PDH1YPR002W AFT2Q08957 416 aa6.09□□□□□ -1.43
PDH1YPR002W GIN4Q12263 1142 aa6.09□□□□□ -1.43
PDH1YPR002W PTC5Q12511 572 aa6.09□□□□□ -1.43
PDH1YPR002W ENT1Q12518 454 aa6.09□□□□□ -1.43
PDH1YPR002W COQ1P18900 473 aa6.08□□□□□ -1.44
PDH1YPR002W RRP43P25359 394 aaPredicted RBP6.08□□□□□ -1.44
PDH1YPR002W REI1P38344 393 aaPredicted RBP6.08□□□□□ -1.44
PDH1YPR002W CAJ1P39101 391 aa6.08□□□□□ -1.44
PDH1YPR002W HDA1P53973 706 aa6.08□□□□□ -1.44
PDH1YPR002W HCR1Q05775 265 aaKnown RBP6.08□□□□□ -1.44
PDH1YPR002W PUN1Q06991 263 aa6.08□□□□□ -1.44
PDH1YPR002W CHO2P05374 869 aaKnown RBP6.07□□□□□ -1.44
PDH1YPR002W RPO26P20435 155 aa6.07□□□□□ -1.44
PDH1YPR002W HCA4P20448 770 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms