Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC16.24■□□□□ 0.196e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-206ENST00000593818 924 ntTSL 216.04■□□□□ 0.162e-8■□□□□ 8.3
HNRNPUQ00839 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC15.95■□□□□ 0.146e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.036e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC13.97□□□□□ -0.176e-6■□□□□ 8.3
HNRNPUQ00839 HMGA2-209ENST00000539662 485 ntTSL 313.72□□□□□ -0.216e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC11.92□□□□□ -0.56e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC11.53□□□□□ -0.566e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC11.31□□□□□ -0.66e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC10.49□□□□□ -0.736e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-201ENST00000519173 473 ntTSL 310.09□□□□□ -0.796e-6■□□□□ 8.3
HNRNPUQ00839 AKIRIN1-204ENST00000531822 718 ntTSL 510.01□□□□□ -0.816e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.69□□□□□ -1.026e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-209ENST00000476646 730 ntTSL 36.38□□□□□ -1.396e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.55□□□□□ -1.526e-6■□□□□ 8.3
HNRNPUQ00839 GPI-212ENST00000589985 1516 ntTSL 326.15■■□□□ 1.786e-8■□□□□ 8.3
HNRNPUQ00839 SAFB-209ENST00000591666 632 ntTSL 325.42■■□□□ 1.664e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-207ENST00000589863 2708 ntTSL 223.72■■□□□ 1.394e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-204ENST00000586934 995 ntTSL 523.3■■□□□ 1.324e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.014e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.974e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.94e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.734e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-208ENST00000590485 548 ntTSL 37.18□□□□□ -1.264e-7■□□□□ 8.3
HNRNPUQ00839 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.043e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-204ENST00000427721 1007 ntTSL 220.29■□□□□ 0.843e-8■□□□□ 8.3
HNRNPUQ00839 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.783e-8■□□□□ 8.3
HNRNPUQ00839 IFITM10-202ENST00000382123 3807 ntTSL 319.22■□□□□ 0.673e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-202ENST00000636579 350 ntTSL 318.95■□□□□ 0.623e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.173e-8■□□□□ 8.3
HNRNPUQ00839 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.685e-8■□□□□ 8.2
HNRNPUQ00839 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.135e-8■□□□□ 8.2
HNRNPUQ00839 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.29■□□□□ 0.683e-6■□□□□ 8.2
HNRNPUQ00839 FAM214A-206ENST00000561543 931 ntTSL 331.29■■■□□ 2.61e-7■□□□□ 8.2
HNRNPUQ00839 FAM214A-205ENST00000561490 547 ntTSL 42.09□□□□□ -2.071e-7■□□□□ 8.2
HNRNPUQ00839 FAM214A-209ENST00000566768 576 ntTSL 31.62□□□□□ -2.151e-7■□□□□ 8.2
HNRNPUQ00839 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.377e-6■□□□□ 8.2
HNRNPUQ00839 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.08■■□□□ 1.137e-6■□□□□ 8.2
HNRNPUQ00839 EFNA1-203ENST00000469878 1288 ntTSL 316.79■□□□□ 0.287e-6■□□□□ 8.2
HNRNPUQ00839 SMAD3-213ENST00000560175 542 ntTSL 416.71■□□□□ 0.277e-6■□□□□ 8.2
HNRNPUQ00839 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC16.58■□□□□ 0.247e-6■□□□□ 8.2
HNRNPUQ00839 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC17.77■□□□□ 0.441e-323■□□□□ 8.2
HNRNPUQ00839 AC105402.3-201ENST00000601658 784 ntTSL 5 BASIC13.82□□□□□ -0.21e-323■□□□□ 8.2
HNRNPUQ00839 RBM47-208ENST00000511598 836 ntTSL 225.14■■□□□ 1.625e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-213ENST00000514782 797 ntTSL 324.19■■□□□ 1.465e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-205ENST00000505414 856 ntTSL 323.47■■□□□ 1.355e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-214ENST00000515053 1100 ntTSL 223.29■■□□□ 1.325e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.28■■□□□ 1.325e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-209ENST00000511902 657 ntTSL 322.17■■□□□ 1.145e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-204ENST00000505220 741 ntTSL 219.93■□□□□ 0.785e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.595e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-207ENST00000510871 4951 ntTSL 1 (best)18.56■□□□□ 0.565e-6■□□□□ 8.1
HNRNPUQ00839 MSI2-211ENST00000579531 472 ntTSL 26.04□□□□□ -1.445e-6■□□□□ 8.1
HNRNPUQ00839 MSI2-213ENST00000581523 534 ntTSL 25.85□□□□□ -1.475e-6■□□□□ 8.1
HNRNPUQ00839 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.11e-7■□□□□ 8.1
HNRNPUQ00839 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.16□□□□□ -1.261e-7■□□□□ 8.1
HNRNPUQ00839 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.88■■□□□ 1.899e-6■□□□□ 8.1
HNRNPUQ00839 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.839e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.799e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.04■■□□□ 1.769e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC25.06■■□□□ 1.69e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.499e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-206ENST00000585508 760 ntTSL 524.29■■□□□ 1.489e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-215ENST00000580234 718 ntTSL 423.7■■□□□ 1.389e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.349e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.22■■□□□ 1.319e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.289e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.929e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC19.88■□□□□ 0.779e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.739e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-210ENST00000590236 616 ntTSL 319.57■□□□□ 0.729e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.26■□□□□ 0.679e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-206ENST00000456339 887 ntTSL 418.32■□□□□ 0.529e-6■□□□□ 8.1
HNRNPUQ00839 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.05■□□□□ 0.489e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-209ENST00000587151 582 ntTSL 517.94■□□□□ 0.469e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-208ENST00000483150 2833 ntTSL 1 (best)17.5■□□□□ 0.399e-6■□□□□ 8.1
HNRNPUQ00839 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.199e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-207ENST00000475946 9067 ntTSL 1 (best)11.09□□□□□ -0.639e-6■□□□□ 8.1
HNRNPUQ00839 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.788e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-210ENST00000435265 1879 ntTSL 226.2■■□□□ 1.788e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-207ENST00000423859 832 ntTSL 323.24■■□□□ 1.318e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-205ENST00000418705 932 ntTSL 321.06■□□□□ 0.968e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.24■□□□□ 0.678e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-203ENST00000411892 584 ntTSL 219.01■□□□□ 0.638e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.628e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-211ENST00000448394 688 ntTSL 218.6■□□□□ 0.578e-8■□□□□ 8.1
HNRNPUQ00839 NEAT1_1.1-201ENST00000620348 120 ntBASIC14.44□□□□□ -0.11e-323■□□□□ 8
HNRNPUQ00839 LINC00894-204ENST00000444489 2951 ntTSL 515.65■□□□□ 0.11e-6■□□□□ 8
Retrieved 88 of 2,288 protein–RNA pairs in 19.1 ms