RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
IRF3-206ENST00000593818 ABCC9O60706 1549 aa29.09■■■□□ 2.25
IRF3-206ENST00000593818 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
IRF3-206ENST00000593818 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
IRF3-206ENST00000593818 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
IRF3-206ENST00000593818 NACADO15069 1562 aa27.23■■□□□ 1.95
IRF3-206ENST00000593818 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
IRF3-206ENST00000593818 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
IRF3-206ENST00000593818 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
IRF3-206ENST00000593818 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
IRF3-206ENST00000593818 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
IRF3-206ENST00000593818 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
IRF3-206ENST00000593818 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
IRF3-206ENST00000593818 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
IRF3-206ENST00000593818 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
IRF3-206ENST00000593818 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
IRF3-206ENST00000593818 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
IRF3-206ENST00000593818 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
IRF3-206ENST00000593818 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
IRF3-206ENST00000593818 CUX2O14529 1486 aa25.41■■□□□ 1.66
IRF3-206ENST00000593818 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
IRF3-206ENST00000593818 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
IRF3-206ENST00000593818 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
IRF3-206ENST00000593818 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
IRF3-206ENST00000593818 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
IRF3-206ENST00000593818 NESP48681 1621 aa24.85■■□□□ 1.57
IRF3-206ENST00000593818 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
IRF3-206ENST00000593818 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
IRF3-206ENST00000593818 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
IRF3-206ENST00000593818 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
IRF3-206ENST00000593818 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
IRF3-206ENST00000593818 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
IRF3-206ENST00000593818 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
IRF3-206ENST00000593818 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
IRF3-206ENST00000593818 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
IRF3-206ENST00000593818 WDR62O43379 1518 aa24.35■■□□□ 1.49
IRF3-206ENST00000593818 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
IRF3-206ENST00000593818 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
IRF3-206ENST00000593818 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
IRF3-206ENST00000593818 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
IRF3-206ENST00000593818 WIZO95785 1651 aa24.02■■□□□ 1.44
IRF3-206ENST00000593818 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
IRF3-206ENST00000593818 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
IRF3-206ENST00000593818 CFTRP13569 1480 aa23.93■■□□□ 1.42
IRF3-206ENST00000593818 RIMBP3CA6NJZ7 1639 aa23.9■■□□□ 1.42
IRF3-206ENST00000593818 RIMBP3BA6NNM3 1639 aa23.9■■□□□ 1.42
IRF3-206ENST00000593818 RIMBP3Q9UFD9 1639 aa23.9■■□□□ 1.42
IRF3-206ENST00000593818 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
IRF3-206ENST00000593818 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
IRF3-206ENST00000593818 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
IRF3-206ENST00000593818 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
IRF3-206ENST00000593818 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
IRF3-206ENST00000593818 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
IRF3-206ENST00000593818 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
IRF3-206ENST00000593818 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
IRF3-206ENST00000593818 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
IRF3-206ENST00000593818 CHD1O14646 1710 aa23.5■■□□□ 1.35
IRF3-206ENST00000593818 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
IRF3-206ENST00000593818 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
IRF3-206ENST00000593818 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
IRF3-206ENST00000593818 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
IRF3-206ENST00000593818 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
IRF3-206ENST00000593818 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
IRF3-206ENST00000593818 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.322e-9■■■■□ 26.5
IRF3-206ENST00000593818 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
IRF3-206ENST00000593818 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
IRF3-206ENST00000593818 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
IRF3-206ENST00000593818 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
IRF3-206ENST00000593818 FBLN2P98095 1184 aa23.12■■□□□ 1.29
IRF3-206ENST00000593818 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
IRF3-206ENST00000593818 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
IRF3-206ENST00000593818 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
IRF3-206ENST00000593818 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
IRF3-206ENST00000593818 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
IRF3-206ENST00000593818 SOGA1O94964 1423 aa23.04■■□□□ 1.28
IRF3-206ENST00000593818 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
IRF3-206ENST00000593818 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
IRF3-206ENST00000593818 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
IRF3-206ENST00000593818 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
IRF3-206ENST00000593818 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
IRF3-206ENST00000593818 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
IRF3-206ENST00000593818 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
IRF3-206ENST00000593818 CUX1P39880 1505 aa22.9■■□□□ 1.26
IRF3-206ENST00000593818 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
IRF3-206ENST00000593818 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
IRF3-206ENST00000593818 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
IRF3-206ENST00000593818 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
IRF3-206ENST00000593818 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
IRF3-206ENST00000593818 CEP170Q5SW79 1584 aa22.69■■□□□ 1.22
IRF3-206ENST00000593818 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
IRF3-206ENST00000593818 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
IRF3-206ENST00000593818 NUP160Q12769 1436 aa22.66■■□□□ 1.22
IRF3-206ENST00000593818 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
IRF3-206ENST00000593818 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
IRF3-206ENST00000593818 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
IRF3-206ENST00000593818 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
IRF3-206ENST00000593818 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
IRF3-206ENST00000593818 ABCC10Q5T3U5 1492 aa22.43■■□□□ 1.18
IRF3-206ENST00000593818 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
IRF3-206ENST00000593818 DIP2BQ9P265 1576 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms