RNA–Protein interactions for RNA: ENST00000456339.5

BRD2-206, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-206ENST00000456339 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
BRD2-206ENST00000456339 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
BRD2-206ENST00000456339 ABCC9O60706 1549 aa33.88■■■■□ 3.01
BRD2-206ENST00000456339 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
BRD2-206ENST00000456339 NACADO15069 1562 aa32.08■■■□□ 2.73
BRD2-206ENST00000456339 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
BRD2-206ENST00000456339 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
BRD2-206ENST00000456339 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
BRD2-206ENST00000456339 UNC13AQ9UPW8 1703 aa31.59■■■□□ 2.65
BRD2-206ENST00000456339 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
BRD2-206ENST00000456339 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
BRD2-206ENST00000456339 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
BRD2-206ENST00000456339 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
BRD2-206ENST00000456339 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
BRD2-206ENST00000456339 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
BRD2-206ENST00000456339 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
BRD2-206ENST00000456339 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
BRD2-206ENST00000456339 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
BRD2-206ENST00000456339 AEBP2Q6ZN18 517 aaPredicted RBP29.67■■■□□ 2.34
BRD2-206ENST00000456339 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
BRD2-206ENST00000456339 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
BRD2-206ENST00000456339 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
BRD2-206ENST00000456339 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
BRD2-206ENST00000456339 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
BRD2-206ENST00000456339 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
BRD2-206ENST00000456339 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
BRD2-206ENST00000456339 CUX2O14529 1486 aa29.26■■■□□ 2.27
BRD2-206ENST00000456339 DNAJC5Q9H3Z4 198 aa29.26■■■□□ 2.27
BRD2-206ENST00000456339 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
BRD2-206ENST00000456339 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
BRD2-206ENST00000456339 NESP48681 1621 aa29.09■■■□□ 2.25
BRD2-206ENST00000456339 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
BRD2-206ENST00000456339 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
BRD2-206ENST00000456339 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
BRD2-206ENST00000456339 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
BRD2-206ENST00000456339 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
BRD2-206ENST00000456339 WIZO95785 1651 aa28.72■■■□□ 2.19
BRD2-206ENST00000456339 CADPSQ9ULU8 1353 aa28.68■■■□□ 2.18
BRD2-206ENST00000456339 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
BRD2-206ENST00000456339 WDR62O43379 1518 aa28.45■■■□□ 2.15
BRD2-206ENST00000456339 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
BRD2-206ENST00000456339 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
BRD2-206ENST00000456339 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
BRD2-206ENST00000456339 CFTRP13569 1480 aa28.35■■■□□ 2.13
BRD2-206ENST00000456339 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
BRD2-206ENST00000456339 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
BRD2-206ENST00000456339 CHIC1Q5VXU3 224 aa28.12■■■□□ 2.09
BRD2-206ENST00000456339 URB2Q14146 1524 aaKnown RBP28.11■■■□□ 2.09
BRD2-206ENST00000456339 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
BRD2-206ENST00000456339 OSCARQ8IYS5 282 aa27.91■■■□□ 2.06
BRD2-206ENST00000456339 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
BRD2-206ENST00000456339 IFT140Q96RY7 1462 aa27.83■■■□□ 2.04
BRD2-206ENST00000456339 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
BRD2-206ENST00000456339 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
BRD2-206ENST00000456339 ZNF608Q9ULD9 1512 aaPredicted RBP27.75■■■□□ 2.03
BRD2-206ENST00000456339 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
BRD2-206ENST00000456339 EIF4G3O43432 1585 aaKnown RBP27.63■■■□□ 2.01
BRD2-206ENST00000456339 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
BRD2-206ENST00000456339 RIMBP3CA6NJZ7 1639 aa27.55■■■□□ 2
BRD2-206ENST00000456339 RIMBP3BA6NNM3 1639 aa27.55■■■□□ 2
BRD2-206ENST00000456339 RIMBP3Q9UFD9 1639 aa27.55■■■□□ 2
BRD2-206ENST00000456339 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
BRD2-206ENST00000456339 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.991e-7■■■■□ 26.4
BRD2-206ENST00000456339 CHD1O14646 1710 aa27.45■■□□□ 1.99
BRD2-206ENST00000456339 ARHGEF11O15085 1522 aa27.45■■□□□ 1.98
BRD2-206ENST00000456339 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
BRD2-206ENST00000456339 SOGA1O94964 1423 aa27.39■■□□□ 1.97
BRD2-206ENST00000456339 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
BRD2-206ENST00000456339 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
BRD2-206ENST00000456339 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
BRD2-206ENST00000456339 FBLN2P98095 1184 aa27.31■■□□□ 1.96
BRD2-206ENST00000456339 CUX1P39880 1505 aa27.31■■□□□ 1.96
BRD2-206ENST00000456339 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
BRD2-206ENST00000456339 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
BRD2-206ENST00000456339 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
BRD2-206ENST00000456339 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
BRD2-206ENST00000456339 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
BRD2-206ENST00000456339 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
BRD2-206ENST00000456339 CLASP1Q7Z460 1538 aa27.12■■□□□ 1.93
BRD2-206ENST00000456339 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
BRD2-206ENST00000456339 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
BRD2-206ENST00000456339 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
BRD2-206ENST00000456339 PBRM1Q86U86 1689 aa27.08■■□□□ 1.93
BRD2-206ENST00000456339 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
BRD2-206ENST00000456339 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
BRD2-206ENST00000456339 ABCA5Q8WWZ7 1642 aa27.02■■□□□ 1.92
BRD2-206ENST00000456339 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
BRD2-206ENST00000456339 TRHP20396 242 aaPredicted RBP26.92■■□□□ 1.9
BRD2-206ENST00000456339 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
BRD2-206ENST00000456339 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
BRD2-206ENST00000456339 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
BRD2-206ENST00000456339 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
BRD2-206ENST00000456339 NUP160Q12769 1436 aa26.73■■□□□ 1.87
BRD2-206ENST00000456339 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
BRD2-206ENST00000456339 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
BRD2-206ENST00000456339 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
BRD2-206ENST00000456339 ERCC6L2Q5T890 1561 aa26.66■■□□□ 1.86
BRD2-206ENST00000456339 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
BRD2-206ENST00000456339 PRG4Q92954 1404 aaPredicted RBP26.46■■□□□ 1.83
BRD2-206ENST00000456339 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms