RNA–Protein interactions for RNA: ENST00000514014.1

RBM47-212, Transcript of RNA binding motif protein 47, humanhuman

TSL 2 BASIC

Gene RBM47, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-212ENST00000514014 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
RBM47-212ENST00000514014 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
RBM47-212ENST00000514014 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
RBM47-212ENST00000514014 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
RBM47-212ENST00000514014 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
RBM47-212ENST00000514014 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
RBM47-212ENST00000514014 ABCC9O60706 1549 aa30.25■■■□□ 2.43
RBM47-212ENST00000514014 SUPT5HO00267 1087 aaKnown RBP30.11■■■□□ 2.41
RBM47-212ENST00000514014 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
RBM47-212ENST00000514014 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
RBM47-212ENST00000514014 NACADO15069 1562 aa29.7■■■□□ 2.34
RBM47-212ENST00000514014 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
RBM47-212ENST00000514014 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
RBM47-212ENST00000514014 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
RBM47-212ENST00000514014 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
RBM47-212ENST00000514014 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
RBM47-212ENST00000514014 MROH2BQ7Z745 1585 aa28.9■■■□□ 2.22
RBM47-212ENST00000514014 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
RBM47-212ENST00000514014 WIZO95785 1651 aa28.72■■■□□ 2.19
RBM47-212ENST00000514014 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
RBM47-212ENST00000514014 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
RBM47-212ENST00000514014 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
RBM47-212ENST00000514014 TOP2AP11388 1531 aaKnown RBP28.2■■■□□ 2.11
RBM47-212ENST00000514014 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
RBM47-212ENST00000514014 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
RBM47-212ENST00000514014 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
RBM47-212ENST00000514014 SMARCA2P51531 1590 aa28.06■■■□□ 2.08
RBM47-212ENST00000514014 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
RBM47-212ENST00000514014 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
RBM47-212ENST00000514014 ATAD2BQ9ULI0 1458 aa27.92■■■□□ 2.06
RBM47-212ENST00000514014 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
RBM47-212ENST00000514014 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
RBM47-212ENST00000514014 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
RBM47-212ENST00000514014 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
RBM47-212ENST00000514014 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
RBM47-212ENST00000514014 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
RBM47-212ENST00000514014 SOGA1O94964 1423 aa27.36■■□□□ 1.97
RBM47-212ENST00000514014 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
RBM47-212ENST00000514014 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
RBM47-212ENST00000514014 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
RBM47-212ENST00000514014 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
RBM47-212ENST00000514014 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
RBM47-212ENST00000514014 CFTRP13569 1480 aa27.07■■□□□ 1.92
RBM47-212ENST00000514014 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
RBM47-212ENST00000514014 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
RBM47-212ENST00000514014 EEA1Q15075 1411 aa26.96■■□□□ 1.91
RBM47-212ENST00000514014 CUX1P39880 1505 aa26.95■■□□□ 1.9
RBM47-212ENST00000514014 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
RBM47-212ENST00000514014 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.89
RBM47-212ENST00000514014 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
RBM47-212ENST00000514014 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
RBM47-212ENST00000514014 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
RBM47-212ENST00000514014 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
RBM47-212ENST00000514014 TRIM26Q12899 539 aaPredicted RBP26.84■■□□□ 1.89
RBM47-212ENST00000514014 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
RBM47-212ENST00000514014 TNIKQ9UKE5 1360 aa26.8■■□□□ 1.88
RBM47-212ENST00000514014 GOLGA3Q08378 1498 aa26.79■■□□□ 1.88
RBM47-212ENST00000514014 NESP48681 1621 aa26.77■■□□□ 1.88
RBM47-212ENST00000514014 KIF21BO75037 1637 aa26.72■■□□□ 1.87
RBM47-212ENST00000514014 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
RBM47-212ENST00000514014 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
RBM47-212ENST00000514014 HRCP23327 699 aa26.67■■□□□ 1.86
RBM47-212ENST00000514014 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
RBM47-212ENST00000514014 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
RBM47-212ENST00000514014 TTBK1Q5TCY1 1321 aaPredicted RBP26.56■■□□□ 1.84
RBM47-212ENST00000514014 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
RBM47-212ENST00000514014 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
RBM47-212ENST00000514014 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
RBM47-212ENST00000514014 CUX2O14529 1486 aa26.48■■□□□ 1.83
RBM47-212ENST00000514014 CLIP1P30622 1438 aa26.46■■□□□ 1.83
RBM47-212ENST00000514014 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
RBM47-212ENST00000514014 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
RBM47-212ENST00000514014 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
RBM47-212ENST00000514014 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
RBM47-212ENST00000514014 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
RBM47-212ENST00000514014 IGF1RP08069 1367 aa26.37■■□□□ 1.81
RBM47-212ENST00000514014 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
RBM47-212ENST00000514014 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
RBM47-212ENST00000514014 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
RBM47-212ENST00000514014 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
RBM47-212ENST00000514014 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
RBM47-212ENST00000514014 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
RBM47-212ENST00000514014 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
RBM47-212ENST00000514014 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
RBM47-212ENST00000514014 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
RBM47-212ENST00000514014 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
RBM47-212ENST00000514014 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
RBM47-212ENST00000514014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
RBM47-212ENST00000514014 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
RBM47-212ENST00000514014 TARBP1Q13395 1621 aaKnown RBP25.97■■□□□ 1.75
RBM47-212ENST00000514014 APLP2Q06481 763 aa25.97■■□□□ 1.75
RBM47-212ENST00000514014 KANK4Q5T7N3 995 aaPredicted RBP25.95■■□□□ 1.75
RBM47-212ENST00000514014 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
RBM47-212ENST00000514014 CUL7Q14999 1698 aa25.92■■□□□ 1.74
RBM47-212ENST00000514014 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
RBM47-212ENST00000514014 P3H3Q8IVL6 736 aa25.91■■□□□ 1.74
RBM47-212ENST00000514014 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
RBM47-212ENST00000514014 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.72
RBM47-212ENST00000514014 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
RBM47-212ENST00000514014 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms