RNA–Protein interactions for RNA: ENST00000511598.5

RBM47-208, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-208ENST00000511598 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
RBM47-208ENST00000511598 CCDC180Q9P1Z9 1646 aa43.05■■■■■ 4.48
RBM47-208ENST00000511598 ABCC9O60706 1549 aa42.75■■■■■ 4.43
RBM47-208ENST00000511598 RB1CC1Q8TDY2 1594 aa40.82■■■■■ 4.13
RBM47-208ENST00000511598 NACADO15069 1562 aa40.59■■■■■ 4.09
RBM47-208ENST00000511598 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
RBM47-208ENST00000511598 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
RBM47-208ENST00000511598 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
RBM47-208ENST00000511598 ZCCHC6Q5VYS8 1495 aaKnown RBP39.92■■■■□ 3.98
RBM47-208ENST00000511598 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
RBM47-208ENST00000511598 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
RBM47-208ENST00000511598 DCAF1Q9Y4B6 1507 aa39.69■■■■□ 3.94
RBM47-208ENST00000511598 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
RBM47-208ENST00000511598 SCRIBQ14160 1630 aa39.31■■■■□ 3.88
RBM47-208ENST00000511598 SHROOM4Q9ULL8 1493 aa39.06■■■■□ 3.84
RBM47-208ENST00000511598 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.77
RBM47-208ENST00000511598 EIF4G1Q04637 1599 aaKnown RBP38.61■■■■□ 3.77
RBM47-208ENST00000511598 CECR2Q9BXF3 1484 aa38.45■■■■□ 3.75
RBM47-208ENST00000511598 SMARCA4P51532 1647 aa37.48■■■■□ 3.59
RBM47-208ENST00000511598 NCAPD3P42695 1498 aa37.41■■■■□ 3.58
RBM47-208ENST00000511598 ATAD2BQ9ULI0 1458 aa37.38■■■■□ 3.57
RBM47-208ENST00000511598 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
RBM47-208ENST00000511598 BAZ1AQ9NRL2 1556 aaPredicted RBP37.33■■■■□ 3.57
RBM47-208ENST00000511598 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
RBM47-208ENST00000511598 BAZ1BQ9UIG0 1483 aaKnown RBP37.1■■■■□ 3.53
RBM47-208ENST00000511598 MROH2BQ7Z745 1585 aa37.07■■■■□ 3.52
RBM47-208ENST00000511598 PEG3Q9GZU2 1588 aa37.04■■■■□ 3.52
RBM47-208ENST00000511598 ERCC6Q03468 1493 aa36.93■■■■□ 3.5
RBM47-208ENST00000511598 NESP48681 1621 aa36.8■■■■□ 3.48
RBM47-208ENST00000511598 WIZO95785 1651 aa36.68■■■■□ 3.46
RBM47-208ENST00000511598 CUX2O14529 1486 aa36.67■■■■□ 3.46
RBM47-208ENST00000511598 LAMC3Q9Y6N6 1575 aa36.59■■■■□ 3.45
RBM47-208ENST00000511598 KIF21AQ7Z4S6 1674 aa36.39■■■■□ 3.42
RBM47-208ENST00000511598 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
RBM47-208ENST00000511598 THOC2Q8NI27 1593 aaKnown RBP36.37■■■■□ 3.41
RBM47-208ENST00000511598 PDS5BQ9NTI5 1447 aa36.35■■■■□ 3.41
RBM47-208ENST00000511598 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
RBM47-208ENST00000511598 DNAJC5Q9H3Z4 198 aa36.22■■■■□ 3.39
RBM47-208ENST00000511598 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
RBM47-208ENST00000511598 MRC2Q9UBG0 1479 aa36.04■■■■□ 3.36
RBM47-208ENST00000511598 CEP164Q9UPV0 1460 aa35.99■■■■□ 3.35
RBM47-208ENST00000511598 CFTRP13569 1480 aa35.97■■■■□ 3.35
RBM47-208ENST00000511598 FANCD2Q9BXW9 1451 aa35.95■■■■□ 3.35
RBM47-208ENST00000511598 WDR62O43379 1518 aa35.93■■■■□ 3.34
RBM47-208ENST00000511598 CCDC88BA6NC98 1476 aa35.78■■■■□ 3.32
RBM47-208ENST00000511598 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
RBM47-208ENST00000511598 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
RBM47-208ENST00000511598 TOPBP1Q92547 1522 aa35.31■■■■□ 3.24
RBM47-208ENST00000511598 ABCC8Q09428 1581 aa35.23■■■■□ 3.23
RBM47-208ENST00000511598 IFT140Q96RY7 1462 aa35.22■■■■□ 3.23
RBM47-208ENST00000511598 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
RBM47-208ENST00000511598 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.21
RBM47-208ENST00000511598 SUPT5HO00267 1087 aaKnown RBP35.11■■■■□ 3.21
RBM47-208ENST00000511598 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
RBM47-208ENST00000511598 EIF4G3O43432 1585 aaKnown RBP35.01■■■■□ 3.2
RBM47-208ENST00000511598 TARBP1Q13395 1621 aaKnown RBP34.96■■■■□ 3.19
RBM47-208ENST00000511598 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
RBM47-208ENST00000511598 TRIM41Q8WV44 630 aa34.9■■■■□ 3.18
RBM47-208ENST00000511598 AQRO60306 1485 aaKnown RBP eCLIP34.85■■■■□ 3.17
RBM47-208ENST00000511598 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
RBM47-208ENST00000511598 CUX1P39880 1505 aa34.81■■■■□ 3.16
RBM47-208ENST00000511598 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
RBM47-208ENST00000511598 SOGA1O94964 1423 aa34.81■■■■□ 3.16
RBM47-208ENST00000511598 CHD1O14646 1710 aa34.72■■■■□ 3.15
RBM47-208ENST00000511598 TDRD9Q8NDG6 1382 aaKnown RBP34.7■■■■□ 3.15
RBM47-208ENST00000511598 FBLN2P98095 1184 aa34.63■■■■□ 3.13
RBM47-208ENST00000511598 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
RBM47-208ENST00000511598 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
RBM47-208ENST00000511598 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
RBM47-208ENST00000511598 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
RBM47-208ENST00000511598 SNAPC4Q5SXM2 1469 aa34.54■■■■□ 3.12
RBM47-208ENST00000511598 ARHGEF11O15085 1522 aa34.51■■■■□ 3.12
RBM47-208ENST00000511598 GRIN2BQ13224 1484 aa34.47■■■■□ 3.11
RBM47-208ENST00000511598 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
RBM47-208ENST00000511598 MAGI1Q96QZ7 1491 aaPredicted RBP34.44■■■■□ 3.1
RBM47-208ENST00000511598 GAPVD1Q14C86 1478 aa34.4■■■■□ 3.1
RBM47-208ENST00000511598 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
RBM47-208ENST00000511598 CHMP7Q8WUX9 453 aaPredicted RBP34.38■■■■□ 3.09
RBM47-208ENST00000511598 BIVM-ERCC5R4GMW8 1640 aa34.37■■■■□ 3.09
RBM47-208ENST00000511598 WRNQ14191 1432 aaPredicted RBP eCLIP34.37■■■■□ 3.09
RBM47-208ENST00000511598 TOP2BQ02880 1626 aa34.36■■■■□ 3.09
RBM47-208ENST00000511598 ABCA5Q8WWZ7 1642 aa34.36■■■■□ 3.09
RBM47-208ENST00000511598 SYNJ1O43426 1573 aa34.34■■■■□ 3.09
RBM47-208ENST00000511598 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
RBM47-208ENST00000511598 CLASP1Q7Z460 1538 aa34.25■■■■□ 3.07
RBM47-208ENST00000511598 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
RBM47-208ENST00000511598 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
RBM47-208ENST00000511598 ADAMTS12P58397 1594 aa34.09■■■■□ 3.05
RBM47-208ENST00000511598 GRIN2AQ12879 1464 aa34.03■■■■□ 3.04
RBM47-208ENST00000511598 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
RBM47-208ENST00000511598 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
RBM47-208ENST00000511598 CEP170Q5SW79 1584 aa33.91■■■■□ 3.02
RBM47-208ENST00000511598 NUP160Q12769 1436 aa33.87■■■■□ 3.01
RBM47-208ENST00000511598 TRHP20396 242 aaPredicted RBP33.8■■■■□ 3
RBM47-208ENST00000511598 ERCC6L2Q5T890 1561 aa33.76■■■□□ 2.99
RBM47-208ENST00000511598 SHROOM2Q13796 1616 aa33.71■■■□□ 2.99
RBM47-208ENST00000511598 KIF27Q86VH2 1401 aa33.69■■■□□ 2.98
RBM47-208ENST00000511598 CUL7Q14999 1698 aa33.61■■■□□ 2.97
RBM47-208ENST00000511598 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
RBM47-208ENST00000511598 IGF1RP08069 1367 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms