RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
RBM47-207ENST00000510871 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
RBM47-207ENST00000510871 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
RBM47-207ENST00000510871 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.26
RBM47-207ENST00000510871 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.07
RBM47-207ENST00000510871 PELP1Q8IZL8 1130 aaKnown RBP21.72■■□□□ 1.07
RBM47-207ENST00000510871 MYT1Q01538 1121 aa21.71■■□□□ 1.07
RBM47-207ENST00000510871 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
RBM47-207ENST00000510871 PCGF6Q9BYE7 350 aa21.33■■□□□ 1
RBM47-207ENST00000510871 TRIM41Q8WV44 630 aa21.31■■□□□ 1
RBM47-207ENST00000510871 APLP2Q06481 763 aa21.11■□□□□ 0.97
RBM47-207ENST00000510871 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
RBM47-207ENST00000510871 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
RBM47-207ENST00000510871 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
RBM47-207ENST00000510871 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
RBM47-207ENST00000510871 LOC105371045A0A1W2PR82 267 aa20.77■□□□□ 0.91
RBM47-207ENST00000510871 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.91
RBM47-207ENST00000510871 ABCC9O60706 1549 aa20.76■□□□□ 0.91
RBM47-207ENST00000510871 HRCP23327 699 aa20.7■□□□□ 0.9
RBM47-207ENST00000510871 CCER1Q8TC90 406 aaPredicted RBP20.67■□□□□ 0.9
RBM47-207ENST00000510871 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
RBM47-207ENST00000510871 TRIM26Q12899 539 aaPredicted RBP20.64■□□□□ 0.89
RBM47-207ENST00000510871 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
RBM47-207ENST00000510871 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
RBM47-207ENST00000510871 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
RBM47-207ENST00000510871 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
RBM47-207ENST00000510871 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.86
RBM47-207ENST00000510871 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
RBM47-207ENST00000510871 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
RBM47-207ENST00000510871 ITGAEP38570 1179 aa20■□□□□ 0.79
RBM47-207ENST00000510871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
RBM47-207ENST00000510871 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
RBM47-207ENST00000510871 ERICH6Q7L0X2 663 aa19.82■□□□□ 0.76
RBM47-207ENST00000510871 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
RBM47-207ENST00000510871 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
RBM47-207ENST00000510871 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
RBM47-207ENST00000510871 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
RBM47-207ENST00000510871 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
RBM47-207ENST00000510871 NACADO15069 1562 aa19.69■□□□□ 0.74
RBM47-207ENST00000510871 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
RBM47-207ENST00000510871 FAM50AQ14320 339 aaKnown RBP19.62■□□□□ 0.73
RBM47-207ENST00000510871 NEFLP07196 543 aa19.61■□□□□ 0.73
RBM47-207ENST00000510871 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
RBM47-207ENST00000510871 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
RBM47-207ENST00000510871 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
RBM47-207ENST00000510871 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
RBM47-207ENST00000510871 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
RBM47-207ENST00000510871 POLR3GLQ9BT43 218 aa19.4■□□□□ 0.7
RBM47-207ENST00000510871 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
RBM47-207ENST00000510871 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
RBM47-207ENST00000510871 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
RBM47-207ENST00000510871 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
RBM47-207ENST00000510871 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
RBM47-207ENST00000510871 EEA1Q15075 1411 aa19.27■□□□□ 0.67
RBM47-207ENST00000510871 FBLN2P98095 1184 aa19.25■□□□□ 0.67
RBM47-207ENST00000510871 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
RBM47-207ENST00000510871 CNGB1Q14028 1251 aaPredicted RBP19.24■□□□□ 0.67
RBM47-207ENST00000510871 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
RBM47-207ENST00000510871 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
RBM47-207ENST00000510871 CLIP1P30622 1438 aa19.22■□□□□ 0.67
RBM47-207ENST00000510871 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
RBM47-207ENST00000510871 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
RBM47-207ENST00000510871 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
RBM47-207ENST00000510871 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
RBM47-207ENST00000510871 ANP32CO43423 234 aa19.06■□□□□ 0.64
RBM47-207ENST00000510871 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
RBM47-207ENST00000510871 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
RBM47-207ENST00000510871 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
RBM47-207ENST00000510871 SOGA1O94964 1423 aa19.01■□□□□ 0.63
RBM47-207ENST00000510871 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
RBM47-207ENST00000510871 WIZO95785 1651 aa18.99■□□□□ 0.63
RBM47-207ENST00000510871 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
RBM47-207ENST00000510871 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
RBM47-207ENST00000510871 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
RBM47-207ENST00000510871 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
RBM47-207ENST00000510871 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
RBM47-207ENST00000510871 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
RBM47-207ENST00000510871 BCANQ96GW7 911 aa18.88■□□□□ 0.61
RBM47-207ENST00000510871 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
RBM47-207ENST00000510871 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
RBM47-207ENST00000510871 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
RBM47-207ENST00000510871 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
RBM47-207ENST00000510871 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
RBM47-207ENST00000510871 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
RBM47-207ENST00000510871 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
RBM47-207ENST00000510871 MIER1Q8N108 512 aa18.74■□□□□ 0.59
RBM47-207ENST00000510871 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
RBM47-207ENST00000510871 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
RBM47-207ENST00000510871 CUX2O14529 1486 aa18.72■□□□□ 0.59
RBM47-207ENST00000510871 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
RBM47-207ENST00000510871 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
RBM47-207ENST00000510871 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
RBM47-207ENST00000510871 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
RBM47-207ENST00000510871 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
RBM47-207ENST00000510871 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
RBM47-207ENST00000510871 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
RBM47-207ENST00000510871 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
RBM47-207ENST00000510871 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
RBM47-207ENST00000510871 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
RBM47-207ENST00000510871 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.565e-6■□□□□ 8.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms