RNA–Protein interactions for RNA: ENST00000591666.5

SAFB-209, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 632 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-209ENST00000591666 NISCHQ9Y2I1 1504 aa48.23■■■■■ 5.31
SAFB-209ENST00000591666 CCDC180Q9P1Z9 1646 aa42.85■■■■■ 4.45
SAFB-209ENST00000591666 ABCC9O60706 1549 aa42.06■■■■■ 4.32
SAFB-209ENST00000591666 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
SAFB-209ENST00000591666 DCAF8L2P0C7V8 631 aa40.38■■■■■ 4.05
SAFB-209ENST00000591666 NACADO15069 1562 aa40.36■■■■■ 4.05
SAFB-209ENST00000591666 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
SAFB-209ENST00000591666 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
SAFB-209ENST00000591666 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
SAFB-209ENST00000591666 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
SAFB-209ENST00000591666 PABPN1Q86U42 306 aaKnown RBP eCLIP39.32■■■■□ 3.89
SAFB-209ENST00000591666 BICRAQ9NZM4 1560 aa39.15■■■■□ 3.86
SAFB-209ENST00000591666 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
SAFB-209ENST00000591666 SHROOM4Q9ULL8 1493 aa38.82■■■■□ 3.81
SAFB-209ENST00000591666 DNAJC5BQ9UF47 199 aa38.66■■■■□ 3.78
SAFB-209ENST00000591666 EIF4G1Q04637 1599 aaKnown RBP38.16■■■■□ 3.7
SAFB-209ENST00000591666 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.67
SAFB-209ENST00000591666 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
SAFB-209ENST00000591666 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
SAFB-209ENST00000591666 BAZ1AQ9NRL2 1556 aaPredicted RBP37.39■■■■□ 3.58
SAFB-209ENST00000591666 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
SAFB-209ENST00000591666 NCAPD3P42695 1498 aa37.26■■■■□ 3.56
SAFB-209ENST00000591666 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
SAFB-209ENST00000591666 MROH2BQ7Z745 1585 aa37.16■■■■□ 3.54
SAFB-209ENST00000591666 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
SAFB-209ENST00000591666 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
SAFB-209ENST00000591666 BAZ1BQ9UIG0 1483 aaKnown RBP36.97■■■■□ 3.51
SAFB-209ENST00000591666 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
SAFB-209ENST00000591666 WIZO95785 1651 aa36.7■■■■□ 3.47
SAFB-209ENST00000591666 TOP2AP11388 1531 aaKnown RBP36.37■■■■□ 3.41
SAFB-209ENST00000591666 NESP48681 1621 aa36.35■■■■□ 3.41
SAFB-209ENST00000591666 ERCC6Q03468 1493 aa36.3■■■■□ 3.4
SAFB-209ENST00000591666 LAMC3Q9Y6N6 1575 aa36.26■■■■□ 3.39
SAFB-209ENST00000591666 CADPSQ9ULU8 1353 aa36.2■■■■□ 3.39
SAFB-209ENST00000591666 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
SAFB-209ENST00000591666 CCDC88BA6NC98 1476 aa35.95■■■■□ 3.35
SAFB-209ENST00000591666 CFTRP13569 1480 aa35.95■■■■□ 3.35
SAFB-209ENST00000591666 CUX2O14529 1486 aa35.92■■■■□ 3.34
SAFB-209ENST00000591666 KIF21AQ7Z4S6 1674 aa35.84■■■■□ 3.33
SAFB-209ENST00000591666 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
SAFB-209ENST00000591666 SUPT5HO00267 1087 aaKnown RBP35.78■■■■□ 3.32
SAFB-209ENST00000591666 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
SAFB-209ENST00000591666 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
SAFB-209ENST00000591666 MRC2Q9UBG0 1479 aa35.69■■■■□ 3.3
SAFB-209ENST00000591666 DNAJC5Q9H3Z4 198 aa35.57■■■■□ 3.28
SAFB-209ENST00000591666 WDR62O43379 1518 aa35.56■■■■□ 3.28
SAFB-209ENST00000591666 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
SAFB-209ENST00000591666 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
SAFB-209ENST00000591666 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
SAFB-209ENST00000591666 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
SAFB-209ENST00000591666 DNMBPQ6XZF7 1577 aa35.11■■■■□ 3.21
SAFB-209ENST00000591666 IFT140Q96RY7 1462 aa34.99■■■■□ 3.19
SAFB-209ENST00000591666 POLA1P09884 1462 aaPredicted RBP34.87■■■■□ 3.17
SAFB-209ENST00000591666 CUX1P39880 1505 aa34.86■■■■□ 3.17
SAFB-209ENST00000591666 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
SAFB-209ENST00000591666 FGD5Q6ZNL6 1462 aa34.78■■■■□ 3.16
SAFB-209ENST00000591666 TARBP1Q13395 1621 aaKnown RBP34.74■■■■□ 3.15
SAFB-209ENST00000591666 SOGA1O94964 1423 aa34.74■■■■□ 3.15
SAFB-209ENST00000591666 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
SAFB-209ENST00000591666 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
SAFB-209ENST00000591666 EIF4G3O43432 1585 aaKnown RBP34.64■■■■□ 3.14
SAFB-209ENST00000591666 AQRO60306 1485 aaKnown RBP eCLIP34.62■■■■□ 3.135e-11■■□□□ 12.1
SAFB-209ENST00000591666 TDRD9Q8NDG6 1382 aaKnown RBP34.56■■■■□ 3.12
SAFB-209ENST00000591666 TOP2BQ02880 1626 aa34.53■■■■□ 3.12
SAFB-209ENST00000591666 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
SAFB-209ENST00000591666 WDR97A6NE52 1622 aa34.5■■■■□ 3.11
SAFB-209ENST00000591666 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
SAFB-209ENST00000591666 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
SAFB-209ENST00000591666 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.1
SAFB-209ENST00000591666 GRIN2BQ13224 1484 aa34.35■■■■□ 3.09
SAFB-209ENST00000591666 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
SAFB-209ENST00000591666 SNAPC4Q5SXM2 1469 aa34.31■■■■□ 3.08
SAFB-209ENST00000591666 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
SAFB-209ENST00000591666 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.08
SAFB-209ENST00000591666 FBLN2P98095 1184 aa34.26■■■■□ 3.08
SAFB-209ENST00000591666 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
SAFB-209ENST00000591666 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
SAFB-209ENST00000591666 CHD1O14646 1710 aa34.15■■■■□ 3.06
SAFB-209ENST00000591666 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
SAFB-209ENST00000591666 ERICH3Q5RHP9 1530 aa34.02■■■■□ 3.04
SAFB-209ENST00000591666 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
SAFB-209ENST00000591666 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
SAFB-209ENST00000591666 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
SAFB-209ENST00000591666 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
SAFB-209ENST00000591666 CLASP1Q7Z460 1538 aa33.86■■■■□ 3.01
SAFB-209ENST00000591666 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
SAFB-209ENST00000591666 TRIM41Q8WV44 630 aa33.82■■■■□ 3
SAFB-209ENST00000591666 IGF1RP08069 1367 aa33.82■■■■□ 3
SAFB-209ENST00000591666 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
SAFB-209ENST00000591666 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
SAFB-209ENST00000591666 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
SAFB-209ENST00000591666 NUP160Q12769 1436 aa33.76■■■□□ 2.99
SAFB-209ENST00000591666 CEP170Q5SW79 1584 aa33.69■■■□□ 2.98
SAFB-209ENST00000591666 CUL7Q14999 1698 aa33.66■■■□□ 2.98
SAFB-209ENST00000591666 CARMIL1Q5VZK9 1371 aa33.62■■■□□ 2.97
SAFB-209ENST00000591666 ARAP1Q96P48 1450 aa33.57■■■□□ 2.97
SAFB-209ENST00000591666 CYB5RLQ6IPT4 315 aa33.57■■■□□ 2.96
SAFB-209ENST00000591666 RUSC2Q8N2Y8 1516 aa33.56■■■□□ 2.96
SAFB-209ENST00000591666 SHROOM2Q13796 1616 aa33.44■■■□□ 2.94
SAFB-209ENST00000591666 JPH4Q96JJ6 628 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms