RNA–Protein interactions for RNA: ENST00000515053.5

RBM47-214, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-214ENST00000515053 NISCHQ9Y2I1 1504 aa45.05■■■■■ 4.8
RBM47-214ENST00000515053 CCDC180Q9P1Z9 1646 aa40.15■■■■■ 4.02
RBM47-214ENST00000515053 ABCC9O60706 1549 aa39.4■■■■□ 3.9
RBM47-214ENST00000515053 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
RBM47-214ENST00000515053 NACADO15069 1562 aa37.77■■■■□ 3.64
RBM47-214ENST00000515053 DCAF8L2P0C7V8 631 aa37.59■■■■□ 3.61
RBM47-214ENST00000515053 MYO15BQ96JP2 1530 aa37.51■■■■□ 3.6
RBM47-214ENST00000515053 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
RBM47-214ENST00000515053 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
RBM47-214ENST00000515053 UNC13AQ9UPW8 1703 aa37.04■■■■□ 3.52
RBM47-214ENST00000515053 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
RBM47-214ENST00000515053 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
RBM47-214ENST00000515053 SCRIBQ14160 1630 aa36.58■■■■□ 3.45
RBM47-214ENST00000515053 DNAJC5BQ9UF47 199 aa36.34■■■■□ 3.41
RBM47-214ENST00000515053 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
RBM47-214ENST00000515053 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.32
RBM47-214ENST00000515053 CC2D2AQ9P2K1 1620 aa35.66■■■■□ 3.3
RBM47-214ENST00000515053 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
RBM47-214ENST00000515053 SMARCA4P51532 1647 aa35■■■■□ 3.19
RBM47-214ENST00000515053 BAZ1AQ9NRL2 1556 aaPredicted RBP34.91■■■■□ 3.18
RBM47-214ENST00000515053 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
RBM47-214ENST00000515053 ATAD2BQ9ULI0 1458 aa34.84■■■■□ 3.17
RBM47-214ENST00000515053 SMARCA2P51531 1590 aa34.79■■■■□ 3.16
RBM47-214ENST00000515053 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
RBM47-214ENST00000515053 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
RBM47-214ENST00000515053 HMGXB3Q12766 1538 aa34.67■■■■□ 3.14
RBM47-214ENST00000515053 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
RBM47-214ENST00000515053 WIZO95785 1651 aa34.32■■■■□ 3.08
RBM47-214ENST00000515053 RSF1Q96T23 1441 aaPredicted RBP34.24■■■■□ 3.07
RBM47-214ENST00000515053 NESP48681 1621 aa34.06■■■■□ 3.04
RBM47-214ENST00000515053 LAMC3Q9Y6N6 1575 aa33.96■■■■□ 3.03
RBM47-214ENST00000515053 ERCC6Q03468 1493 aa33.95■■■■□ 3.03
RBM47-214ENST00000515053 TOP2AP11388 1531 aaKnown RBP33.95■■■■□ 3.03
RBM47-214ENST00000515053 CADPSQ9ULU8 1353 aa33.81■■■■□ 3
RBM47-214ENST00000515053 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.99
RBM47-214ENST00000515053 CUX2O14529 1486 aa33.69■■■□□ 2.98
RBM47-214ENST00000515053 KIF21AQ7Z4S6 1674 aa33.68■■■□□ 2.98
RBM47-214ENST00000515053 THOC2Q8NI27 1593 aaKnown RBP33.61■■■□□ 2.97
RBM47-214ENST00000515053 CFTRP13569 1480 aa33.59■■■□□ 2.97
RBM47-214ENST00000515053 CCDC88BA6NC98 1476 aa33.54■■■□□ 2.96
RBM47-214ENST00000515053 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
RBM47-214ENST00000515053 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.94
RBM47-214ENST00000515053 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
RBM47-214ENST00000515053 PRDM2Q13029 1718 aa33.35■■■□□ 2.93
RBM47-214ENST00000515053 WDR62O43379 1518 aa33.32■■■□□ 2.92
RBM47-214ENST00000515053 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
RBM47-214ENST00000515053 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
RBM47-214ENST00000515053 TOPBP1Q92547 1522 aa32.88■■■□□ 2.85
RBM47-214ENST00000515053 ABCC8Q09428 1581 aa32.85■■■□□ 2.85
RBM47-214ENST00000515053 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
RBM47-214ENST00000515053 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
RBM47-214ENST00000515053 IFT140Q96RY7 1462 aa32.71■■■□□ 2.83
RBM47-214ENST00000515053 POLA1P09884 1462 aaPredicted RBP32.6■■■□□ 2.81
RBM47-214ENST00000515053 ZNF608Q9ULD9 1512 aaPredicted RBP32.58■■■□□ 2.81
RBM47-214ENST00000515053 CUX1P39880 1505 aa32.57■■■□□ 2.8
RBM47-214ENST00000515053 TARBP1Q13395 1621 aaKnown RBP32.56■■■□□ 2.8
RBM47-214ENST00000515053 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
RBM47-214ENST00000515053 EIF4G3O43432 1585 aaKnown RBP32.46■■■□□ 2.79
RBM47-214ENST00000515053 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
RBM47-214ENST00000515053 SOGA1O94964 1423 aa32.43■■■□□ 2.78
RBM47-214ENST00000515053 AQRO60306 1485 aaKnown RBP eCLIP32.36■■■□□ 2.77
RBM47-214ENST00000515053 WDR97A6NE52 1622 aa32.29■■■□□ 2.76
RBM47-214ENST00000515053 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
RBM47-214ENST00000515053 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
RBM47-214ENST00000515053 TOP2BQ02880 1626 aa32.26■■■□□ 2.75
RBM47-214ENST00000515053 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.75
RBM47-214ENST00000515053 SYNJ1O43426 1573 aa32.24■■■□□ 2.75
RBM47-214ENST00000515053 OSCARQ8IYS5 282 aa32.23■■■□□ 2.75
RBM47-214ENST00000515053 ABCA10Q8WWZ4 1543 aa32.17■■■□□ 2.74
RBM47-214ENST00000515053 CHD1O14646 1710 aa32.09■■■□□ 2.73
RBM47-214ENST00000515053 GRIN2BQ13224 1484 aa32.08■■■□□ 2.73
RBM47-214ENST00000515053 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
RBM47-214ENST00000515053 GAPVD1Q14C86 1478 aa32.06■■■□□ 2.72
RBM47-214ENST00000515053 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
RBM47-214ENST00000515053 MAGI1Q96QZ7 1491 aaPredicted RBP32.03■■■□□ 2.72
RBM47-214ENST00000515053 PBRM1Q86U86 1689 aa32.03■■■□□ 2.72
RBM47-214ENST00000515053 FBLN2P98095 1184 aa31.94■■■□□ 2.7
RBM47-214ENST00000515053 SYNJ2O15056 1496 aa31.9■■■□□ 2.7
RBM47-214ENST00000515053 CHMP7Q8WUX9 453 aaPredicted RBP31.86■■■□□ 2.69
RBM47-214ENST00000515053 ERICH3Q5RHP9 1530 aa31.78■■■□□ 2.68
RBM47-214ENST00000515053 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
RBM47-214ENST00000515053 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
RBM47-214ENST00000515053 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
RBM47-214ENST00000515053 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
RBM47-214ENST00000515053 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
RBM47-214ENST00000515053 CLASP1Q7Z460 1538 aa31.75■■■□□ 2.67
RBM47-214ENST00000515053 FHAD1B1AJZ9 1412 aa31.68■■■□□ 2.66
RBM47-214ENST00000515053 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
RBM47-214ENST00000515053 TRIM41Q8WV44 630 aa31.64■■■□□ 2.66
RBM47-214ENST00000515053 KIF27Q86VH2 1401 aa31.61■■■□□ 2.65
RBM47-214ENST00000515053 NUP160Q12769 1436 aa31.56■■■□□ 2.64
RBM47-214ENST00000515053 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
RBM47-214ENST00000515053 IGF1RP08069 1367 aa31.51■■■□□ 2.63
RBM47-214ENST00000515053 ARAP1Q96P48 1450 aa31.49■■■□□ 2.63
RBM47-214ENST00000515053 CUL7Q14999 1698 aa31.46■■■□□ 2.63
RBM47-214ENST00000515053 CYB5RLQ6IPT4 315 aa31.41■■■□□ 2.62
RBM47-214ENST00000515053 SHROOM2Q13796 1616 aa31.36■■■□□ 2.61
RBM47-214ENST00000515053 RUSC2Q8N2Y8 1516 aa31.31■■■□□ 2.6
RBM47-214ENST00000515053 CARMIL1Q5VZK9 1371 aa31.3■■■□□ 2.6
RBM47-214ENST00000515053 ERCC6L2Q5T890 1561 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms