RNA–Protein interactions for RNA: ENST00000424848.2

CDK6-202, Transcript of cyclin dependent kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK6, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-202ENST00000424848 NISCHQ9Y2I1 1504 aa49.14■■■■■ 5.46
CDK6-202ENST00000424848 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
CDK6-202ENST00000424848 ABCC9O60706 1549 aa42.52■■■■■ 4.4
CDK6-202ENST00000424848 RB1CC1Q8TDY2 1594 aa41.07■■■■■ 4.16
CDK6-202ENST00000424848 NACADO15069 1562 aa41.03■■■■■ 4.16
CDK6-202ENST00000424848 ZCCHC6Q5VYS8 1495 aaKnown RBP40.99■■■■■ 4.15
CDK6-202ENST00000424848 DCAF8L2P0C7V8 631 aa40.96■■■■■ 4.15
CDK6-202ENST00000424848 MYO15BQ96JP2 1530 aa40.8■■■■■ 4.12
CDK6-202ENST00000424848 DCAF1Q9Y4B6 1507 aa40.69■■■■■ 4.1
CDK6-202ENST00000424848 UNC13AQ9UPW8 1703 aa40.21■■■■■ 4.03
CDK6-202ENST00000424848 SCRIBQ14160 1630 aa39.89■■■■□ 3.98
CDK6-202ENST00000424848 BICRAQ9NZM4 1560 aa39.73■■■■□ 3.95
CDK6-202ENST00000424848 PABPN1Q86U42 306 aaKnown RBP eCLIP39.68■■■■□ 3.94
CDK6-202ENST00000424848 SHROOM4Q9ULL8 1493 aa39.41■■■■□ 3.9
CDK6-202ENST00000424848 EIF4G1Q04637 1599 aaKnown RBP38.71■■■■□ 3.79
CDK6-202ENST00000424848 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
CDK6-202ENST00000424848 CC2D2AQ9P2K1 1620 aa38.53■■■■□ 3.76
CDK6-202ENST00000424848 CECR2Q9BXF3 1484 aa38.2■■■■□ 3.71
CDK6-202ENST00000424848 SMARCA4P51532 1647 aa38.16■■■■□ 3.7
CDK6-202ENST00000424848 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
CDK6-202ENST00000424848 SMARCA2P51531 1590 aa37.88■■■■□ 3.66
CDK6-202ENST00000424848 MROH2BQ7Z745 1585 aa37.86■■■■□ 3.65
CDK6-202ENST00000424848 ATAD2BQ9ULI0 1458 aa37.83■■■■□ 3.65
CDK6-202ENST00000424848 NCAPD3P42695 1498 aa37.76■■■■□ 3.64
CDK6-202ENST00000424848 PEG3Q9GZU2 1588 aa37.75■■■■□ 3.63
CDK6-202ENST00000424848 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
CDK6-202ENST00000424848 BAZ1BQ9UIG0 1483 aaKnown RBP37.6■■■■□ 3.61
CDK6-202ENST00000424848 WIZO95785 1651 aa37.53■■■■□ 3.6
CDK6-202ENST00000424848 RSF1Q96T23 1441 aaPredicted RBP37.52■■■■□ 3.6
CDK6-202ENST00000424848 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
CDK6-202ENST00000424848 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
CDK6-202ENST00000424848 NESP48681 1621 aa36.82■■■■□ 3.48
CDK6-202ENST00000424848 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.48
CDK6-202ENST00000424848 ERCC6Q03468 1493 aa36.72■■■■□ 3.47
CDK6-202ENST00000424848 CADPSQ9ULU8 1353 aa36.68■■■■□ 3.46
CDK6-202ENST00000424848 CCDC88BA6NC98 1476 aa36.63■■■■□ 3.45
CDK6-202ENST00000424848 PDS5BQ9NTI5 1447 aa36.55■■■■□ 3.44
CDK6-202ENST00000424848 KIF21AQ7Z4S6 1674 aa36.54■■■■□ 3.44
CDK6-202ENST00000424848 CFTRP13569 1480 aa36.51■■■■□ 3.43
CDK6-202ENST00000424848 PRDM2Q13029 1718 aa36.51■■■■□ 3.43
CDK6-202ENST00000424848 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.41
CDK6-202ENST00000424848 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
CDK6-202ENST00000424848 CEP164Q9UPV0 1460 aa36.29■■■■□ 3.4
CDK6-202ENST00000424848 CUX2O14529 1486 aa36.25■■■■□ 3.39
CDK6-202ENST00000424848 MRC2Q9UBG0 1479 aa36.18■■■■□ 3.38
CDK6-202ENST00000424848 WDR62O43379 1518 aa36.07■■■■□ 3.36
CDK6-202ENST00000424848 URB2Q14146 1524 aaKnown RBP35.91■■■■□ 3.34
CDK6-202ENST00000424848 ABCC8Q09428 1581 aa35.79■■■■□ 3.32
CDK6-202ENST00000424848 DNMBPQ6XZF7 1577 aa35.77■■■■□ 3.32
CDK6-202ENST00000424848 TOPBP1Q92547 1522 aa35.75■■■■□ 3.31
CDK6-202ENST00000424848 CUX1P39880 1505 aa35.53■■■■□ 3.28
CDK6-202ENST00000424848 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
CDK6-202ENST00000424848 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
CDK6-202ENST00000424848 FGD5Q6ZNL6 1462 aa35.4■■■■□ 3.26
CDK6-202ENST00000424848 WRNQ14191 1432 aaPredicted RBP eCLIP35.39■■■■□ 3.26
CDK6-202ENST00000424848 TARBP1Q13395 1621 aaKnown RBP35.36■■■■□ 3.25
CDK6-202ENST00000424848 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
CDK6-202ENST00000424848 TOP2BQ02880 1626 aa35.32■■■■□ 3.25
CDK6-202ENST00000424848 SYNJ1O43426 1573 aa35.3■■■■□ 3.24
CDK6-202ENST00000424848 SOGA1O94964 1423 aa35.28■■■■□ 3.24
CDK6-202ENST00000424848 ZNF608Q9ULD9 1512 aaPredicted RBP35.26■■■■□ 3.24
CDK6-202ENST00000424848 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.24
CDK6-202ENST00000424848 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
CDK6-202ENST00000424848 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
CDK6-202ENST00000424848 AQRO60306 1485 aaKnown RBP eCLIP35.07■■■■□ 3.216e-7■■■■□ 24
CDK6-202ENST00000424848 ABCA10Q8WWZ4 1543 aa35.06■■■■□ 3.2
CDK6-202ENST00000424848 TDRD9Q8NDG6 1382 aaKnown RBP35.03■■■■□ 3.2
CDK6-202ENST00000424848 PBRM1Q86U86 1689 aa34.97■■■■□ 3.19
CDK6-202ENST00000424848 ABCA5Q8WWZ7 1642 aa34.96■■■■□ 3.19
CDK6-202ENST00000424848 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
CDK6-202ENST00000424848 GRIN2BQ13224 1484 aa34.89■■■■□ 3.18
CDK6-202ENST00000424848 CHD1O14646 1710 aa34.83■■■■□ 3.17
CDK6-202ENST00000424848 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
CDK6-202ENST00000424848 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
CDK6-202ENST00000424848 MAGI1Q96QZ7 1491 aaPredicted RBP34.8■■■■□ 3.16
CDK6-202ENST00000424848 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
CDK6-202ENST00000424848 OSCARQ8IYS5 282 aa34.69■■■■□ 3.14
CDK6-202ENST00000424848 ERICH3Q5RHP9 1530 aa34.68■■■■□ 3.14
CDK6-202ENST00000424848 FBLN2P98095 1184 aa34.66■■■■□ 3.14
CDK6-202ENST00000424848 KIF27Q86VH2 1401 aa34.66■■■■□ 3.14
CDK6-202ENST00000424848 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
CDK6-202ENST00000424848 ADAMTS12P58397 1594 aa34.63■■■■□ 3.13
CDK6-202ENST00000424848 CHMP7Q8WUX9 453 aaPredicted RBP34.58■■■■□ 3.13
CDK6-202ENST00000424848 CHIC1Q5VXU3 224 aa34.54■■■■□ 3.12
CDK6-202ENST00000424848 FHAD1B1AJZ9 1412 aa34.51■■■■□ 3.11
CDK6-202ENST00000424848 CUL7Q14999 1698 aa34.48■■■■□ 3.11
CDK6-202ENST00000424848 IGF1RP08069 1367 aa34.45■■■■□ 3.11
CDK6-202ENST00000424848 GRIN2AQ12879 1464 aa34.45■■■■□ 3.1
CDK6-202ENST00000424848 CLASP1Q7Z460 1538 aa34.35■■■■□ 3.09
CDK6-202ENST00000424848 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
CDK6-202ENST00000424848 CEP170Q5SW79 1584 aa34.27■■■■□ 3.08
CDK6-202ENST00000424848 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
CDK6-202ENST00000424848 NUP160Q12769 1436 aa34.25■■■■□ 3.07
CDK6-202ENST00000424848 EEA1Q15075 1411 aa34.24■■■■□ 3.07
CDK6-202ENST00000424848 RIMBP3CA6NJZ7 1639 aa34.22■■■■□ 3.07
CDK6-202ENST00000424848 RIMBP3BA6NNM3 1639 aa34.22■■■■□ 3.07
CDK6-202ENST00000424848 RIMBP3Q9UFD9 1639 aa34.22■■■■□ 3.07
CDK6-202ENST00000424848 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
CDK6-202ENST00000424848 CSRNP3Q8WYN3 585 aa34.13■■■■□ 3.05
CDK6-202ENST00000424848 RAPGEF2Q9Y4G8 1499 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms