RNA–Protein interactions for RNA: ENST00000511902.5

RBM47-209, Transcript of RNA binding motif protein 47, humanhuman

TSL 3

Gene RBM47, Length 657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-209ENST00000511902 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
RBM47-209ENST00000511902 CCDC180Q9P1Z9 1646 aa38.62■■■■□ 3.77
RBM47-209ENST00000511902 ABCC9O60706 1549 aa38.09■■■■□ 3.69
RBM47-209ENST00000511902 RB1CC1Q8TDY2 1594 aa36.52■■■■□ 3.44
RBM47-209ENST00000511902 NACADO15069 1562 aa36.4■■■■□ 3.42
RBM47-209ENST00000511902 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
RBM47-209ENST00000511902 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
RBM47-209ENST00000511902 ZCCHC6Q5VYS8 1495 aaKnown RBP35.97■■■■□ 3.35
RBM47-209ENST00000511902 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
RBM47-209ENST00000511902 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
RBM47-209ENST00000511902 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
RBM47-209ENST00000511902 BICRAQ9NZM4 1560 aa35.4■■■■□ 3.26
RBM47-209ENST00000511902 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
RBM47-209ENST00000511902 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
RBM47-209ENST00000511902 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
RBM47-209ENST00000511902 EIF4G1Q04637 1599 aaKnown RBP34.5■■■■□ 3.11
RBM47-209ENST00000511902 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
RBM47-209ENST00000511902 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
RBM47-209ENST00000511902 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
RBM47-209ENST00000511902 NCAPD3P42695 1498 aa33.6■■■□□ 2.97
RBM47-209ENST00000511902 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
RBM47-209ENST00000511902 ATAD2BQ9ULI0 1458 aa33.55■■■□□ 2.96
RBM47-209ENST00000511902 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
RBM47-209ENST00000511902 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
RBM47-209ENST00000511902 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
RBM47-209ENST00000511902 PEG3Q9GZU2 1588 aa33.33■■■□□ 2.93
RBM47-209ENST00000511902 BAZ1BQ9UIG0 1483 aaKnown RBP33.26■■■□□ 2.92
RBM47-209ENST00000511902 WIZO95785 1651 aa32.96■■■□□ 2.87
RBM47-209ENST00000511902 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
RBM47-209ENST00000511902 NESP48681 1621 aa32.86■■■□□ 2.85
RBM47-209ENST00000511902 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
RBM47-209ENST00000511902 LAMC3Q9Y6N6 1575 aa32.76■■■□□ 2.84
RBM47-209ENST00000511902 CUX2O14529 1486 aa32.64■■■□□ 2.82
RBM47-209ENST00000511902 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
RBM47-209ENST00000511902 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
RBM47-209ENST00000511902 PDS5BQ9NTI5 1447 aa32.57■■■□□ 2.8
RBM47-209ENST00000511902 KIF21AQ7Z4S6 1674 aa32.46■■■□□ 2.79
RBM47-209ENST00000511902 THOC2Q8NI27 1593 aaKnown RBP32.42■■■□□ 2.78
RBM47-209ENST00000511902 CFTRP13569 1480 aa32.34■■■□□ 2.77
RBM47-209ENST00000511902 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
RBM47-209ENST00000511902 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
RBM47-209ENST00000511902 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
RBM47-209ENST00000511902 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
RBM47-209ENST00000511902 WDR62O43379 1518 aa32.12■■■□□ 2.73
RBM47-209ENST00000511902 DNAJC5Q9H3Z4 198 aa32.04■■■□□ 2.72
RBM47-209ENST00000511902 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
RBM47-209ENST00000511902 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
RBM47-209ENST00000511902 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
RBM47-209ENST00000511902 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
RBM47-209ENST00000511902 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
RBM47-209ENST00000511902 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
RBM47-209ENST00000511902 IFT140Q96RY7 1462 aa31.55■■■□□ 2.64
RBM47-209ENST00000511902 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
RBM47-209ENST00000511902 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
RBM47-209ENST00000511902 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
RBM47-209ENST00000511902 CUX1P39880 1505 aa31.29■■■□□ 2.6
RBM47-209ENST00000511902 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
RBM47-209ENST00000511902 OSCARQ8IYS5 282 aa31.27■■■□□ 2.6
RBM47-209ENST00000511902 SOGA1O94964 1423 aa31.25■■■□□ 2.59
RBM47-209ENST00000511902 FGD5Q6ZNL6 1462 aa31.24■■■□□ 2.59
RBM47-209ENST00000511902 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
RBM47-209ENST00000511902 AQRO60306 1485 aaKnown RBP eCLIP31.21■■■□□ 2.59
RBM47-209ENST00000511902 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
RBM47-209ENST00000511902 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
RBM47-209ENST00000511902 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
RBM47-209ENST00000511902 TOP2BQ02880 1626 aa30.95■■■□□ 2.55
RBM47-209ENST00000511902 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
RBM47-209ENST00000511902 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
RBM47-209ENST00000511902 CHD1O14646 1710 aa30.93■■■□□ 2.54
RBM47-209ENST00000511902 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
RBM47-209ENST00000511902 FBLN2P98095 1184 aa30.92■■■□□ 2.54
RBM47-209ENST00000511902 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
RBM47-209ENST00000511902 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
RBM47-209ENST00000511902 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
RBM47-209ENST00000511902 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
RBM47-209ENST00000511902 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
RBM47-209ENST00000511902 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
RBM47-209ENST00000511902 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
RBM47-209ENST00000511902 CHMP7Q8WUX9 453 aaPredicted RBP30.8■■■□□ 2.52
RBM47-209ENST00000511902 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
RBM47-209ENST00000511902 RIMBP3CA6NJZ7 1639 aa30.75■■■□□ 2.51
RBM47-209ENST00000511902 RIMBP3BA6NNM3 1639 aa30.75■■■□□ 2.51
RBM47-209ENST00000511902 RIMBP3Q9UFD9 1639 aa30.75■■■□□ 2.51
RBM47-209ENST00000511902 ARHGEF11O15085 1522 aa30.72■■■□□ 2.51
RBM47-209ENST00000511902 CLASP1Q7Z460 1538 aa30.61■■■□□ 2.49
RBM47-209ENST00000511902 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.48
RBM47-209ENST00000511902 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
RBM47-209ENST00000511902 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
RBM47-209ENST00000511902 GRIN2AQ12879 1464 aa30.51■■■□□ 2.48
RBM47-209ENST00000511902 CYB5RLQ6IPT4 315 aa30.48■■■□□ 2.47
RBM47-209ENST00000511902 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
RBM47-209ENST00000511902 NUP160Q12769 1436 aa30.39■■■□□ 2.46
RBM47-209ENST00000511902 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
RBM47-209ENST00000511902 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
RBM47-209ENST00000511902 IGF1RP08069 1367 aa30.29■■■□□ 2.44
RBM47-209ENST00000511902 CUL7Q14999 1698 aa30.22■■■□□ 2.43
RBM47-209ENST00000511902 SHROOM2Q13796 1616 aa30.19■■■□□ 2.42
RBM47-209ENST00000511902 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
RBM47-209ENST00000511902 JPH4Q96JJ6 628 aa30.11■■■□□ 2.41
RBM47-209ENST00000511902 CARMIL1Q5VZK9 1371 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms