Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SPON1Q9HCB6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
SPON1Q9HCB6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SPON1Q9HCB6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.74■■■□□ 2.83
SPON1Q9HCB6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SPON1Q9HCB6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SPON1Q9HCB6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SPON1Q9HCB6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.73■■■□□ 2.83
SPON1Q9HCB6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
SPON1Q9HCB6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
SPON1Q9HCB6 AC009831.1-201ENST00000580420 1582 ntBASIC32.72■■■□□ 2.83
SPON1Q9HCB6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.72■■■□□ 2.83
SPON1Q9HCB6 AC010980.1-201ENST00000587192 1142 ntBASIC32.72■■■□□ 2.83
SPON1Q9HCB6 BHLHE23-202ENST00000612929 1109 ntBASIC32.72■■■□□ 2.83
SPON1Q9HCB6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SPON1Q9HCB6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
SPON1Q9HCB6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.7■■■□□ 2.83
SPON1Q9HCB6 AL356441.2-201ENST00000443009 864 ntBASIC32.7■■■□□ 2.83
SPON1Q9HCB6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SPON1Q9HCB6 AC007029.1-201ENST00000604183 313 ntBASIC32.7■■■□□ 2.83
SPON1Q9HCB6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.7■■■□□ 2.83
SPON1Q9HCB6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
SPON1Q9HCB6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
SPON1Q9HCB6 MIR219A2-201ENST00000608502 1504 ntBASIC32.69■■■□□ 2.82
SPON1Q9HCB6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.69■■■□□ 2.82
SPON1Q9HCB6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
SPON1Q9HCB6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SPON1Q9HCB6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.68■■■□□ 2.82
SPON1Q9HCB6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SPON1Q9HCB6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.67■■■□□ 2.82
SPON1Q9HCB6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.67■■■□□ 2.82
SPON1Q9HCB6 AC074183.2-201ENST00000623112 922 ntBASIC32.67■■■□□ 2.82
SPON1Q9HCB6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.66■■■□□ 2.82
SPON1Q9HCB6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.66■■■□□ 2.82
SPON1Q9HCB6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.66■■■□□ 2.82
SPON1Q9HCB6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
SPON1Q9HCB6 YBX1P4-201ENST00000392794 808 ntBASIC32.65■■■□□ 2.82
SPON1Q9HCB6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SPON1Q9HCB6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.64■■■□□ 2.82
SPON1Q9HCB6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
SPON1Q9HCB6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SPON1Q9HCB6 AC126177.7-201ENST00000547904 679 ntBASIC32.63■■■□□ 2.81
SPON1Q9HCB6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SPON1Q9HCB6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SPON1Q9HCB6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SPON1Q9HCB6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.6■■■□□ 2.81
SPON1Q9HCB6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.6■■■□□ 2.81
SPON1Q9HCB6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SPON1Q9HCB6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.59■■■□□ 2.81
SPON1Q9HCB6 AC008406.3-201ENST00000620001 1374 ntBASIC32.58■■■□□ 2.81
SPON1Q9HCB6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SPON1Q9HCB6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.58■■■□□ 2.81
SPON1Q9HCB6 AC110285.7-201ENST00000624417 1536 ntBASIC32.57■■■□□ 2.8
SPON1Q9HCB6 AC103834.1-201ENST00000520383 144 ntBASIC32.57■■■□□ 2.8
SPON1Q9HCB6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SPON1Q9HCB6 AL157400.5-201ENST00000507624 621 ntBASIC32.56■■■□□ 2.8
SPON1Q9HCB6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.56■■■□□ 2.8
SPON1Q9HCB6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.55■■■□□ 2.8
SPON1Q9HCB6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SPON1Q9HCB6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.54■■■□□ 2.8
SPON1Q9HCB6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
SPON1Q9HCB6 DUX4L9-201ENST00000449051 1259 ntBASIC32.53■■■□□ 2.8
SPON1Q9HCB6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.53■■■□□ 2.8
SPON1Q9HCB6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
SPON1Q9HCB6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SPON1Q9HCB6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.51■■■□□ 2.79
SPON1Q9HCB6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SPON1Q9HCB6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.5■■■□□ 2.79
SPON1Q9HCB6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.5■■■□□ 2.79
SPON1Q9HCB6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
SPON1Q9HCB6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.5■■■□□ 2.79
SPON1Q9HCB6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
SPON1Q9HCB6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.48■■■□□ 2.79
SPON1Q9HCB6 WHAMMP2-203ENST00000563942 1603 ntBASIC32.48■■■□□ 2.79
SPON1Q9HCB6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
SPON1Q9HCB6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.47■■■□□ 2.79
SPON1Q9HCB6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.46■■■□□ 2.79
SPON1Q9HCB6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.46■■■□□ 2.79
SPON1Q9HCB6 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.46■■■□□ 2.79
SPON1Q9HCB6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SPON1Q9HCB6 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.46■■■□□ 2.79
SPON1Q9HCB6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SPON1Q9HCB6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SPON1Q9HCB6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.45■■■□□ 2.79
SPON1Q9HCB6 AC135983.2-203ENST00000454486 1613 ntBASIC32.44■■■□□ 2.78
SPON1Q9HCB6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SPON1Q9HCB6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
SPON1Q9HCB6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SPON1Q9HCB6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms