Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.39■■□□□ 1.82
HAPLN3Q96S86 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HAPLN3Q96S86 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HAPLN3Q96S86 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.37■■□□□ 1.81
HAPLN3Q96S86 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
HAPLN3Q96S86 AC110285.7-201ENST00000624417 1536 ntBASIC26.37■■□□□ 1.81
HAPLN3Q96S86 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HAPLN3Q96S86 DRD5P2-201ENST00000421395 2012 ntBASIC26.35■■□□□ 1.81
HAPLN3Q96S86 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.35■■□□□ 1.81
HAPLN3Q96S86 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HAPLN3Q96S86 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HAPLN3Q96S86 MIR3648-2-201ENST00000581792 180 ntBASIC26.34■■□□□ 1.81
HAPLN3Q96S86 MIR3648-1-201ENST00000615959 180 ntBASIC26.34■■□□□ 1.81
HAPLN3Q96S86 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 CR559946.2-201ENST00000623684 991 ntBASIC26.33■■□□□ 1.81
HAPLN3Q96S86 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.33■■□□□ 1.81
HAPLN3Q96S86 AP002414.2-202ENST00000590929 1450 ntBASIC26.32■■□□□ 1.8
HAPLN3Q96S86 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.32■■□□□ 1.8
HAPLN3Q96S86 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HAPLN3Q96S86 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HAPLN3Q96S86 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HAPLN3Q96S86 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.29■■□□□ 1.8
HAPLN3Q96S86 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
HAPLN3Q96S86 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HAPLN3Q96S86 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HAPLN3Q96S86 AC016575.1-201ENST00000607026 382 ntBASIC26.26■■□□□ 1.79
HAPLN3Q96S86 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HAPLN3Q96S86 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.24■■□□□ 1.79
HAPLN3Q96S86 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
HAPLN3Q96S86 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HAPLN3Q96S86 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HAPLN3Q96S86 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.21■■□□□ 1.79
HAPLN3Q96S86 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HAPLN3Q96S86 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
HAPLN3Q96S86 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HAPLN3Q96S86 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HAPLN3Q96S86 AC008813.1-201ENST00000536597 885 ntBASIC26.19■■□□□ 1.78
HAPLN3Q96S86 AC142086.6-201ENST00000621154 1765 ntBASIC26.19■■□□□ 1.78
HAPLN3Q96S86 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HAPLN3Q96S86 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
HAPLN3Q96S86 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HAPLN3Q96S86 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
HAPLN3Q96S86 MIR639-201ENST00000384974 98 ntBASIC26.16■■□□□ 1.78
HAPLN3Q96S86 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
HAPLN3Q96S86 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms