Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H2AAQ96QV6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.83■■□□□ 1.09
HIST1H2AAQ96QV6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST1H2AAQ96QV6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H2AAQ96QV6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
HIST1H2AAQ96QV6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H2AAQ96QV6 DUX4L29-201ENST00000425409 679 ntBASIC21.79■■□□□ 1.08
HIST1H2AAQ96QV6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H2AAQ96QV6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HIST1H2AAQ96QV6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST1H2AAQ96QV6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H2AAQ96QV6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.77■■□□□ 1.08
HIST1H2AAQ96QV6 AP002414.2-202ENST00000590929 1450 ntBASIC21.77■■□□□ 1.07
HIST1H2AAQ96QV6 RPS2P35-201ENST00000443417 897 ntBASIC21.76■■□□□ 1.07
HIST1H2AAQ96QV6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HIST1H2AAQ96QV6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2AAQ96QV6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
HIST1H2AAQ96QV6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2AAQ96QV6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.74■■□□□ 1.07
HIST1H2AAQ96QV6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 BX255925.1-201ENST00000566954 1854 ntBASIC21.73■■□□□ 1.07
HIST1H2AAQ96QV6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2AAQ96QV6 AC021231.2-201ENST00000594613 730 ntBASIC21.72■■□□□ 1.07
HIST1H2AAQ96QV6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2AAQ96QV6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2AAQ96QV6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2AAQ96QV6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H2AAQ96QV6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2AAQ96QV6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HIST1H2AAQ96QV6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2AAQ96QV6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2AAQ96QV6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2AAQ96QV6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2AAQ96QV6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2AAQ96QV6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2AAQ96QV6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2AAQ96QV6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2AAQ96QV6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
HIST1H2AAQ96QV6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.68■■□□□ 1.06
HIST1H2AAQ96QV6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.67■■□□□ 1.06
HIST1H2AAQ96QV6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 LINC01003-201ENST00000564834 1764 ntBASIC21.66■■□□□ 1.06
HIST1H2AAQ96QV6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HIST1H2AAQ96QV6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2AAQ96QV6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2AAQ96QV6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIST1H2AAQ96QV6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIST1H2AAQ96QV6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.64■■□□□ 1.05
HIST1H2AAQ96QV6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.64■■□□□ 1.05
HIST1H2AAQ96QV6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIST1H2AAQ96QV6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.63■■□□□ 1.05
HIST1H2AAQ96QV6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms