Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDND2Q8NHS1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLDND2Q8NHS1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDND2Q8NHS1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDND2Q8NHS1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLDND2Q8NHS1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDND2Q8NHS1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
CLDND2Q8NHS1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDND2Q8NHS1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.45■■□□□ 1.02
CLDND2Q8NHS1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLDND2Q8NHS1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDND2Q8NHS1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDND2Q8NHS1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.44■■□□□ 1.02
CLDND2Q8NHS1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDND2Q8NHS1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDND2Q8NHS1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CLDND2Q8NHS1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.43■■□□□ 1.02
CLDND2Q8NHS1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLDND2Q8NHS1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CLDND2Q8NHS1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDND2Q8NHS1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
CLDND2Q8NHS1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDND2Q8NHS1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
CLDND2Q8NHS1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDND2Q8NHS1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDND2Q8NHS1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDND2Q8NHS1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDND2Q8NHS1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.4■■□□□ 1.02
CLDND2Q8NHS1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.4■■□□□ 1.02
CLDND2Q8NHS1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.4■■□□□ 1.02
CLDND2Q8NHS1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CLDND2Q8NHS1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CLDND2Q8NHS1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDND2Q8NHS1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDND2Q8NHS1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDND2Q8NHS1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDND2Q8NHS1 AC008813.1-201ENST00000536597 885 ntBASIC21.37■■□□□ 1.01
CLDND2Q8NHS1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.37■■□□□ 1.01
CLDND2Q8NHS1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDND2Q8NHS1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDND2Q8NHS1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDND2Q8NHS1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDND2Q8NHS1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDND2Q8NHS1 AC110285.7-201ENST00000624417 1536 ntBASIC21.35■■□□□ 1.01
CLDND2Q8NHS1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDND2Q8NHS1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLDND2Q8NHS1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CLDND2Q8NHS1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDND2Q8NHS1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDND2Q8NHS1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 GPX1-201ENST00000419349 1106 ntBASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDND2Q8NHS1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDND2Q8NHS1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDND2Q8NHS1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDND2Q8NHS1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDND2Q8NHS1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLDND2Q8NHS1 ST7-AS1-201ENST00000456775 1889 ntBASIC21.31■■□□□ 1
CLDND2Q8NHS1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDND2Q8NHS1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDND2Q8NHS1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.31■■□□□ 1
CLDND2Q8NHS1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.31■■□□□ 1
CLDND2Q8NHS1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.31■■□□□ 1
CLDND2Q8NHS1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDND2Q8NHS1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLDND2Q8NHS1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.31■■□□□ 1
CLDND2Q8NHS1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDND2Q8NHS1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDND2Q8NHS1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDND2Q8NHS1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.3■■□□□ 1
CLDND2Q8NHS1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms