Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCSK9Q8NBP7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
PCSK9Q8NBP7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCSK9Q8NBP7 ECEL1P2-201ENST00000461596 1295 ntBASIC28.57■■■□□ 2.16
PCSK9Q8NBP7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCSK9Q8NBP7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.57■■■□□ 2.16
PCSK9Q8NBP7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCSK9Q8NBP7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.56■■■□□ 2.16
PCSK9Q8NBP7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCSK9Q8NBP7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.55■■■□□ 2.16
PCSK9Q8NBP7 TSPY13P-201ENST00000338964 914 ntBASIC28.55■■■□□ 2.16
PCSK9Q8NBP7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCSK9Q8NBP7 AC126177.7-201ENST00000547904 679 ntBASIC28.55■■■□□ 2.16
PCSK9Q8NBP7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.54■■■□□ 2.16
PCSK9Q8NBP7 KRT18P60-201ENST00000312876 1297 ntBASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCSK9Q8NBP7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCSK9Q8NBP7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCSK9Q8NBP7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCSK9Q8NBP7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.51■■■□□ 2.15
PCSK9Q8NBP7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.5■■■□□ 2.15
PCSK9Q8NBP7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.5■■■□□ 2.15
PCSK9Q8NBP7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 AC004987.1-201ENST00000428627 508 ntBASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 ATP5G2P3-201ENST00000429083 425 ntBASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
PCSK9Q8NBP7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PCSK9Q8NBP7 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.48■■■□□ 2.15
PCSK9Q8NBP7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.47■■■□□ 2.15
PCSK9Q8NBP7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.47■■■□□ 2.15
PCSK9Q8NBP7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.47■■■□□ 2.15
PCSK9Q8NBP7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCSK9Q8NBP7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCSK9Q8NBP7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCSK9Q8NBP7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
PCSK9Q8NBP7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.45■■■□□ 2.15
PCSK9Q8NBP7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PCSK9Q8NBP7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
PCSK9Q8NBP7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.44■■■□□ 2.14
PCSK9Q8NBP7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PCSK9Q8NBP7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCSK9Q8NBP7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCSK9Q8NBP7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCSK9Q8NBP7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCSK9Q8NBP7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCSK9Q8NBP7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCSK9Q8NBP7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCSK9Q8NBP7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.41■■■□□ 2.14
PCSK9Q8NBP7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCSK9Q8NBP7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCSK9Q8NBP7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.4■■■□□ 2.14
PCSK9Q8NBP7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCSK9Q8NBP7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCSK9Q8NBP7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCSK9Q8NBP7 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.39■■■□□ 2.14
PCSK9Q8NBP7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCSK9Q8NBP7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCSK9Q8NBP7 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.39■■■□□ 2.14
PCSK9Q8NBP7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.38■■■□□ 2.13
PCSK9Q8NBP7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
PCSK9Q8NBP7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCSK9Q8NBP7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCSK9Q8NBP7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.37■■■□□ 2.13
PCSK9Q8NBP7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCSK9Q8NBP7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCSK9Q8NBP7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.36■■■□□ 2.13
PCSK9Q8NBP7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.35■■■□□ 2.13
PCSK9Q8NBP7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
PCSK9Q8NBP7 AL157400.5-201ENST00000507624 621 ntBASIC28.34■■■□□ 2.13
PCSK9Q8NBP7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCSK9Q8NBP7 RARRES2P1-201ENST00000474487 481 ntBASIC28.33■■■□□ 2.13
PCSK9Q8NBP7 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.33■■■□□ 2.13
PCSK9Q8NBP7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
PCSK9Q8NBP7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
PCSK9Q8NBP7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCSK9Q8NBP7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCSK9Q8NBP7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCSK9Q8NBP7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.32■■■□□ 2.12
PCSK9Q8NBP7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.31■■■□□ 2.12
PCSK9Q8NBP7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCSK9Q8NBP7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCSK9Q8NBP7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.3■■■□□ 2.12
PCSK9Q8NBP7 AC007029.1-201ENST00000604183 313 ntBASIC28.3■■■□□ 2.12
PCSK9Q8NBP7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCSK9Q8NBP7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.29■■■□□ 2.12
PCSK9Q8NBP7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCSK9Q8NBP7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms