Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C11orf88Q6PI97 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.71■■□□□ 1.07
C11orf88Q6PI97 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.7■■□□□ 1.06
C11orf88Q6PI97 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
C11orf88Q6PI97 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.7■■□□□ 1.06
C11orf88Q6PI97 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C11orf88Q6PI97 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
C11orf88Q6PI97 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf88Q6PI97 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.68■■□□□ 1.06
C11orf88Q6PI97 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
C11orf88Q6PI97 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C11orf88Q6PI97 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.67■■□□□ 1.06
C11orf88Q6PI97 AL449106.1-201ENST00000608517 1980 ntBASIC21.67■■□□□ 1.06
C11orf88Q6PI97 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf88Q6PI97 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C11orf88Q6PI97 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf88Q6PI97 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf88Q6PI97 BX255925.1-201ENST00000566954 1854 ntBASIC21.66■■□□□ 1.06
C11orf88Q6PI97 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C11orf88Q6PI97 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf88Q6PI97 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf88Q6PI97 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf88Q6PI97 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
C11orf88Q6PI97 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C11orf88Q6PI97 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.64■■□□□ 1.06
C11orf88Q6PI97 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 WASH5P-204ENST00000632292 975 ntBASIC21.64■■□□□ 1.05
C11orf88Q6PI97 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
C11orf88Q6PI97 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C11orf88Q6PI97 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C11orf88Q6PI97 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C11orf88Q6PI97 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
C11orf88Q6PI97 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf88Q6PI97 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf88Q6PI97 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf88Q6PI97 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.61■■□□□ 1.05
C11orf88Q6PI97 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C11orf88Q6PI97 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf88Q6PI97 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.6■■□□□ 1.05
C11orf88Q6PI97 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf88Q6PI97 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C11orf88Q6PI97 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C11orf88Q6PI97 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
C11orf88Q6PI97 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
C11orf88Q6PI97 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.59■■□□□ 1.05
C11orf88Q6PI97 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
C11orf88Q6PI97 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C11orf88Q6PI97 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
C11orf88Q6PI97 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.58■■□□□ 1.05
C11orf88Q6PI97 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C11orf88Q6PI97 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
C11orf88Q6PI97 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
C11orf88Q6PI97 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C11orf88Q6PI97 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.57■■□□□ 1.04
C11orf88Q6PI97 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf88Q6PI97 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.57■■□□□ 1.04
C11orf88Q6PI97 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf88Q6PI97 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
C11orf88Q6PI97 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C11orf88Q6PI97 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 MIR762-201ENST00000390236 83 ntBASIC21.55■■□□□ 1.04
C11orf88Q6PI97 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.55■■□□□ 1.04
C11orf88Q6PI97 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 AC005559.1-201ENST00000589661 871 ntBASIC21.54■■□□□ 1.04
C11orf88Q6PI97 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C11orf88Q6PI97 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 AC044849.2-201ENST00000606596 710 ntBASIC21.53■■□□□ 1.04
C11orf88Q6PI97 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C11orf88Q6PI97 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.52■■□□□ 1.04
C11orf88Q6PI97 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms