Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC39.4■■■■□ 3.9
CDC42BPAQ5VT25 U85056.1-201ENST00000616429 682 ntBASIC39.4■■■■□ 3.9
CDC42BPAQ5VT25 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC39.39■■■■□ 3.9
CDC42BPAQ5VT25 GFER-205ENST00000569451 517 ntTSL 5 BASIC39.39■■■■□ 3.9
CDC42BPAQ5VT25 AC018358.1-201ENST00000631079 1402 ntBASIC39.38■■■■□ 3.89
CDC42BPAQ5VT25 AL157400.5-201ENST00000507624 621 ntBASIC39.38■■■■□ 3.89
CDC42BPAQ5VT25 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CDC42BPAQ5VT25 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC39.37■■■■□ 3.89
CDC42BPAQ5VT25 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
CDC42BPAQ5VT25 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDC42BPAQ5VT25 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDC42BPAQ5VT25 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDC42BPAQ5VT25 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDC42BPAQ5VT25 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
CDC42BPAQ5VT25 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC39.35■■■■□ 3.89
CDC42BPAQ5VT25 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC39.35■■■■□ 3.89
CDC42BPAQ5VT25 KRT18P60-201ENST00000312876 1297 ntBASIC39.34■■■■□ 3.89
CDC42BPAQ5VT25 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC39.34■■■■□ 3.89
CDC42BPAQ5VT25 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
CDC42BPAQ5VT25 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC39.32■■■■□ 3.89
CDC42BPAQ5VT25 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
CDC42BPAQ5VT25 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
CDC42BPAQ5VT25 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
CDC42BPAQ5VT25 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
CDC42BPAQ5VT25 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
CDC42BPAQ5VT25 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
CDC42BPAQ5VT25 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC39.3■■■■□ 3.88
CDC42BPAQ5VT25 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CDC42BPAQ5VT25 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CDC42BPAQ5VT25 MED25-210ENST00000612854 801 ntTSL 5 BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 MED25-214ENST00000622402 642 ntTSL 5 BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 MOB2-207ENST00000614710 705 ntTSL 5 BASIC39.28■■■■□ 3.88
CDC42BPAQ5VT25 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC39.27■■■■□ 3.88
CDC42BPAQ5VT25 AL033527.3-201ENST00000566366 1196 ntBASIC39.27■■■■□ 3.88
CDC42BPAQ5VT25 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
CDC42BPAQ5VT25 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC39.26■■■■□ 3.87
CDC42BPAQ5VT25 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC39.26■■■■□ 3.87
CDC42BPAQ5VT25 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
CDC42BPAQ5VT25 MEST-211ENST00000437945 1455 ntTSL 5 BASIC39.25■■■■□ 3.87
CDC42BPAQ5VT25 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CDC42BPAQ5VT25 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
CDC42BPAQ5VT25 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC39.24■■■■□ 3.87
CDC42BPAQ5VT25 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CDC42BPAQ5VT25 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC39.23■■■■□ 3.87
CDC42BPAQ5VT25 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CDC42BPAQ5VT25 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CDC42BPAQ5VT25 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.2■■■■□ 3.87
CDC42BPAQ5VT25 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CDC42BPAQ5VT25 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.19■■■■□ 3.86
CDC42BPAQ5VT25 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC39.18■■■■□ 3.86
CDC42BPAQ5VT25 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC39.17■■■■□ 3.86
CDC42BPAQ5VT25 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
CDC42BPAQ5VT25 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC39.15■■■■□ 3.86
CDC42BPAQ5VT25 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
CDC42BPAQ5VT25 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC39.15■■■■□ 3.86
CDC42BPAQ5VT25 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
CDC42BPAQ5VT25 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC39.14■■■■□ 3.86
CDC42BPAQ5VT25 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC39.14■■■■□ 3.86
CDC42BPAQ5VT25 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC39.14■■■■□ 3.86
CDC42BPAQ5VT25 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC39.13■■■■□ 3.85
CDC42BPAQ5VT25 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC39.13■■■■□ 3.85
CDC42BPAQ5VT25 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC39.12■■■■□ 3.85
CDC42BPAQ5VT25 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
CDC42BPAQ5VT25 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
CDC42BPAQ5VT25 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
CDC42BPAQ5VT25 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC39.11■■■■□ 3.85
CDC42BPAQ5VT25 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
CDC42BPAQ5VT25 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC39.11■■■■□ 3.85
CDC42BPAQ5VT25 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC39.11■■■■□ 3.85
CDC42BPAQ5VT25 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
CDC42BPAQ5VT25 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
CDC42BPAQ5VT25 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
CDC42BPAQ5VT25 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC39.08■■■■□ 3.85
CDC42BPAQ5VT25 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
CDC42BPAQ5VT25 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
CDC42BPAQ5VT25 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
CDC42BPAQ5VT25 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC39.06■■■■□ 3.84
CDC42BPAQ5VT25 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CDC42BPAQ5VT25 TSPY13P-201ENST00000338964 914 ntBASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 ECEL1P2-201ENST00000461596 1295 ntBASIC39.03■■■■□ 3.84
CDC42BPAQ5VT25 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC39.02■■■■□ 3.84
CDC42BPAQ5VT25 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
CDC42BPAQ5VT25 AC004987.1-201ENST00000428627 508 ntBASIC39.02■■■■□ 3.84
CDC42BPAQ5VT25 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
CDC42BPAQ5VT25 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC38.99■■■■□ 3.83
CDC42BPAQ5VT25 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CDC42BPAQ5VT25 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC38.98■■■■□ 3.83
CDC42BPAQ5VT25 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.97■■■■□ 3.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms