Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HS1BP3Q53T59 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
HS1BP3Q53T59 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HS1BP3Q53T59 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HS1BP3Q53T59 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
HS1BP3Q53T59 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.39■■■□□ 2.13
HS1BP3Q53T59 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HS1BP3Q53T59 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
HS1BP3Q53T59 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
HS1BP3Q53T59 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
HS1BP3Q53T59 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
HS1BP3Q53T59 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
HS1BP3Q53T59 AP004833.2-201ENST00000532228 1454 ntBASIC28.37■■■□□ 2.13
HS1BP3Q53T59 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HS1BP3Q53T59 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HS1BP3Q53T59 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HS1BP3Q53T59 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
HS1BP3Q53T59 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HS1BP3Q53T59 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
HS1BP3Q53T59 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
HS1BP3Q53T59 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
HS1BP3Q53T59 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
HS1BP3Q53T59 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
HS1BP3Q53T59 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
HS1BP3Q53T59 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
HS1BP3Q53T59 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HS1BP3Q53T59 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HS1BP3Q53T59 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HS1BP3Q53T59 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HS1BP3Q53T59 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HS1BP3Q53T59 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
HS1BP3Q53T59 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HS1BP3Q53T59 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
HS1BP3Q53T59 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HS1BP3Q53T59 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.3■■■□□ 2.12
HS1BP3Q53T59 RARRES2P7-201ENST00000567349 469 ntBASIC28.3■■■□□ 2.12
HS1BP3Q53T59 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
HS1BP3Q53T59 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HS1BP3Q53T59 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HS1BP3Q53T59 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HS1BP3Q53T59 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.28■■■□□ 2.12
HS1BP3Q53T59 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.27■■■□□ 2.12
HS1BP3Q53T59 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.27■■■□□ 2.12
HS1BP3Q53T59 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
HS1BP3Q53T59 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HS1BP3Q53T59 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HS1BP3Q53T59 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HS1BP3Q53T59 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.24■■■□□ 2.11
HS1BP3Q53T59 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.24■■■□□ 2.11
HS1BP3Q53T59 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HS1BP3Q53T59 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
HS1BP3Q53T59 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HS1BP3Q53T59 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HS1BP3Q53T59 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
HS1BP3Q53T59 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.22■■■□□ 2.11
HS1BP3Q53T59 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HS1BP3Q53T59 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HS1BP3Q53T59 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.21■■■□□ 2.11
HS1BP3Q53T59 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
HS1BP3Q53T59 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
HS1BP3Q53T59 AC010864.1-201ENST00000609407 1511 ntBASIC28.21■■■□□ 2.11
HS1BP3Q53T59 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.2■■■□□ 2.11
HS1BP3Q53T59 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.2■■■□□ 2.11
HS1BP3Q53T59 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
HS1BP3Q53T59 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.2■■■□□ 2.1
HS1BP3Q53T59 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HS1BP3Q53T59 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.18■■■□□ 2.1
HS1BP3Q53T59 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HS1BP3Q53T59 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
HS1BP3Q53T59 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HS1BP3Q53T59 DUSP8P4-201ENST00000399538 1761 ntBASIC28.17■■■□□ 2.1
HS1BP3Q53T59 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HS1BP3Q53T59 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
HS1BP3Q53T59 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
HS1BP3Q53T59 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HS1BP3Q53T59 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms