Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCNYL3P0C7X3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CCNYL3P0C7X3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.4■■□□□ 1.5
CCNYL3P0C7X3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.39■■□□□ 1.49
CCNYL3P0C7X3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.39■■□□□ 1.49
CCNYL3P0C7X3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.39■■□□□ 1.49
CCNYL3P0C7X3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.38■■□□□ 1.49
CCNYL3P0C7X3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CCNYL3P0C7X3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CCNYL3P0C7X3 AC008813.1-201ENST00000536597 885 ntBASIC24.37■■□□□ 1.49
CCNYL3P0C7X3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCNYL3P0C7X3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCNYL3P0C7X3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCNYL3P0C7X3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCNYL3P0C7X3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCNYL3P0C7X3 AC135983.2-203ENST00000454486 1613 ntBASIC24.35■■□□□ 1.49
CCNYL3P0C7X3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCNYL3P0C7X3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CCNYL3P0C7X3 GPX1-201ENST00000419349 1106 ntBASIC24.34■■□□□ 1.49
CCNYL3P0C7X3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCNYL3P0C7X3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNYL3P0C7X3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
CCNYL3P0C7X3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNYL3P0C7X3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNYL3P0C7X3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNYL3P0C7X3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNYL3P0C7X3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNYL3P0C7X3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.33■■□□□ 1.48
CCNYL3P0C7X3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 WHAMMP2-203ENST00000563942 1603 ntBASIC24.32■■□□□ 1.48
CCNYL3P0C7X3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNYL3P0C7X3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNYL3P0C7X3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNYL3P0C7X3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CCNYL3P0C7X3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNYL3P0C7X3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
CCNYL3P0C7X3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNYL3P0C7X3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNYL3P0C7X3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCNYL3P0C7X3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CCNYL3P0C7X3 RARRES2P2-201ENST00000394842 485 ntBASIC24.29■■□□□ 1.48
CCNYL3P0C7X3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCNYL3P0C7X3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.29■■□□□ 1.48
CCNYL3P0C7X3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CCNYL3P0C7X3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCNYL3P0C7X3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CCNYL3P0C7X3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CCNYL3P0C7X3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCNYL3P0C7X3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCNYL3P0C7X3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCNYL3P0C7X3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.27■■□□□ 1.48
CCNYL3P0C7X3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCNYL3P0C7X3 RNF126P1-201ENST00000567452 1320 ntBASIC24.26■■□□□ 1.47
CCNYL3P0C7X3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CCNYL3P0C7X3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCNYL3P0C7X3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.25■■□□□ 1.47
CCNYL3P0C7X3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.25■■□□□ 1.47
CCNYL3P0C7X3 AC022413.1-201ENST00000624602 984 ntBASIC24.25■■□□□ 1.47
CCNYL3P0C7X3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.25■■□□□ 1.47
CCNYL3P0C7X3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCNYL3P0C7X3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.24■■□□□ 1.47
CCNYL3P0C7X3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CCNYL3P0C7X3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCNYL3P0C7X3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCNYL3P0C7X3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNYL3P0C7X3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCNYL3P0C7X3 AC110285.7-201ENST00000624417 1536 ntBASIC24.23■■□□□ 1.47
CCNYL3P0C7X3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNYL3P0C7X3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNYL3P0C7X3 ABHD17AP5-201ENST00000580133 923 ntBASIC24.21■■□□□ 1.47
CCNYL3P0C7X3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNYL3P0C7X3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNYL3P0C7X3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNYL3P0C7X3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCNYL3P0C7X3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNYL3P0C7X3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.19■■□□□ 1.46
CCNYL3P0C7X3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.19■■□□□ 1.46
CCNYL3P0C7X3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNYL3P0C7X3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCNYL3P0C7X3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.18■■□□□ 1.46
CCNYL3P0C7X3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCNYL3P0C7X3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCNYL3P0C7X3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.17■■□□□ 1.46
CCNYL3P0C7X3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CCNYL3P0C7X3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNYL3P0C7X3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms