Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL391121.1-201ENST00000607967 1349 ntBASIC27.75■■■□□ 2.03
TPM1P09493 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TPM1P09493 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.75■■■□□ 2.03
TPM1P09493 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TPM1P09493 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
TPM1P09493 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TPM1P09493 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TPM1P09493 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
TPM1P09493 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.72■■■□□ 2.03
TPM1P09493 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TPM1P09493 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TPM1P09493 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.71■■■□□ 2.03
TPM1P09493 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TPM1P09493 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
TPM1P09493 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
TPM1P09493 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
TPM1P09493 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
TPM1P09493 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TPM1P09493 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TPM1P09493 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TPM1P09493 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.69■■■□□ 2.02
TPM1P09493 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
TPM1P09493 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
TPM1P09493 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TPM1P09493 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
TPM1P09493 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.68■■■□□ 2.02
TPM1P09493 AP002414.2-202ENST00000590929 1450 ntBASIC27.68■■■□□ 2.02
TPM1P09493 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
TPM1P09493 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TPM1P09493 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TPM1P09493 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TPM1P09493 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TPM1P09493 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TPM1P09493 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.67■■■□□ 2.02
TPM1P09493 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TPM1P09493 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.67■■■□□ 2.02
TPM1P09493 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TPM1P09493 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
TPM1P09493 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TPM1P09493 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TPM1P09493 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.65■■■□□ 2.02
TPM1P09493 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TPM1P09493 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TPM1P09493 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TPM1P09493 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TPM1P09493 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TPM1P09493 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
TPM1P09493 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.63■■■□□ 2.01
TPM1P09493 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TPM1P09493 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TPM1P09493 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TPM1P09493 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.62■■■□□ 2.01
TPM1P09493 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TPM1P09493 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TPM1P09493 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
TPM1P09493 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TPM1P09493 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.61■■■□□ 2.01
TPM1P09493 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.6■■■□□ 2.01
TPM1P09493 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.6■■■□□ 2.01
TPM1P09493 CAHM-201ENST00000604200 896 ntBASIC27.6■■■□□ 2.01
TPM1P09493 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TPM1P09493 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.59■■■□□ 2.01
TPM1P09493 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TPM1P09493 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
TPM1P09493 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
TPM1P09493 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TPM1P09493 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
TPM1P09493 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TPM1P09493 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TPM1P09493 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
TPM1P09493 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.55■■■□□ 2
TPM1P09493 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TPM1P09493 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TPM1P09493 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TPM1P09493 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.54■■■□□ 2
TPM1P09493 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
TPM1P09493 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.54■■■□□ 2
TPM1P09493 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.54■■■□□ 2
TPM1P09493 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.53■■■□□ 2
TPM1P09493 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
TPM1P09493 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.53■■■□□ 2
TPM1P09493 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TPM1P09493 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.52■■■□□ 2
TPM1P09493 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TPM1P09493 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TPM1P09493 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.51■■□□□ 1.99
TPM1P09493 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.51■■□□□ 1.99
TPM1P09493 AC097358.2-201ENST00000607541 1159 ntBASIC27.51■■□□□ 1.99
TPM1P09493 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
TPM1P09493 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TPM1P09493 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.5■■□□□ 1.99
TPM1P09493 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
TPM1P09493 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
TPM1P09493 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TPM1P09493 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.49■■□□□ 1.99
TPM1P09493 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TPM1P09493 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TPM1P09493 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TPM1P09493 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
TPM1P09493 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms