Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CHL1O00533 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHL1O00533 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHL1O00533 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHL1O00533 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHL1O00533 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.1■■■□□ 2.89
CHL1O00533 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC33.1■■■□□ 2.89
CHL1O00533 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.1■■■□□ 2.89
CHL1O00533 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC33.1■■■□□ 2.89
CHL1O00533 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC33.09■■■□□ 2.89
CHL1O00533 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHL1O00533 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHL1O00533 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
CHL1O00533 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHL1O00533 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
CHL1O00533 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.08■■■□□ 2.89
CHL1O00533 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHL1O00533 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC33.07■■■□□ 2.88
CHL1O00533 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CHL1O00533 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC33.07■■■□□ 2.88
CHL1O00533 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CHL1O00533 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC33.06■■■□□ 2.88
CHL1O00533 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
CHL1O00533 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
CHL1O00533 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CHL1O00533 AC008813.1-201ENST00000536597 885 ntBASIC33.06■■■□□ 2.88
CHL1O00533 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHL1O00533 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.05■■■□□ 2.88
CHL1O00533 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.05■■■□□ 2.88
CHL1O00533 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CHL1O00533 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.04■■■□□ 2.88
CHL1O00533 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHL1O00533 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.03■■■□□ 2.88
CHL1O00533 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
CHL1O00533 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.03■■■□□ 2.88
CHL1O00533 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHL1O00533 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHL1O00533 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CHL1O00533 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
CHL1O00533 AC139426.1-201ENST00000568218 2529 ntBASIC33.01■■■□□ 2.87
CHL1O00533 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33■■■□□ 2.87
CHL1O00533 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHL1O00533 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CHL1O00533 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHL1O00533 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHL1O00533 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.98■■■□□ 2.87
CHL1O00533 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.97■■■□□ 2.87
CHL1O00533 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CHL1O00533 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHL1O00533 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.95■■■□□ 2.86
CHL1O00533 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHL1O00533 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
CHL1O00533 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.94■■■□□ 2.86
CHL1O00533 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.93■■■□□ 2.86
CHL1O00533 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHL1O00533 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.93■■■□□ 2.86
CHL1O00533 AC148477.6-201ENST00000623746 465 ntBASIC32.93■■■□□ 2.86
CHL1O00533 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
CHL1O00533 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.92■■■□□ 2.86
CHL1O00533 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CHL1O00533 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.91■■■□□ 2.86
CHL1O00533 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.91■■■□□ 2.86
CHL1O00533 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CHL1O00533 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CHL1O00533 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHL1O00533 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CHL1O00533 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CHL1O00533 AP002414.2-202ENST00000590929 1450 ntBASIC32.89■■■□□ 2.86
CHL1O00533 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.88■■■□□ 2.85
CHL1O00533 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.88■■■□□ 2.85
CHL1O00533 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHL1O00533 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CHL1O00533 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHL1O00533 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHL1O00533 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHL1O00533 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CHL1O00533 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CHL1O00533 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.85■■■□□ 2.85
CHL1O00533 MIR219A2-201ENST00000608502 1504 ntBASIC32.84■■■□□ 2.85
CHL1O00533 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
CHL1O00533 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CHL1O00533 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
CHL1O00533 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CHL1O00533 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CHL1O00533 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CHL1O00533 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms