Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.14■■□□□ 1.93
RCCD1A6NED2 AP002414.2-202ENST00000590929 1450 ntBASIC27.13■■□□□ 1.93
RCCD1A6NED2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RCCD1A6NED2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.13■■□□□ 1.93
RCCD1A6NED2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.12■■□□□ 1.93
RCCD1A6NED2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RCCD1A6NED2 AC135731.1-201ENST00000569415 2548 ntBASIC27.11■■□□□ 1.93
RCCD1A6NED2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RCCD1A6NED2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.1■■□□□ 1.93
RCCD1A6NED2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
RCCD1A6NED2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RCCD1A6NED2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RCCD1A6NED2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RCCD1A6NED2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.08■■□□□ 1.93
RCCD1A6NED2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.08■■□□□ 1.93
RCCD1A6NED2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RCCD1A6NED2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RCCD1A6NED2 AL449106.1-201ENST00000608517 1980 ntBASIC27.07■■□□□ 1.92
RCCD1A6NED2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RCCD1A6NED2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.06■■□□□ 1.92
RCCD1A6NED2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RCCD1A6NED2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RCCD1A6NED2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.05■■□□□ 1.92
RCCD1A6NED2 MIR762-201ENST00000390236 83 ntBASIC27.05■■□□□ 1.92
RCCD1A6NED2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RCCD1A6NED2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RCCD1A6NED2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.02■■□□□ 1.92
RCCD1A6NED2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RCCD1A6NED2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RCCD1A6NED2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27■■□□□ 1.91
RCCD1A6NED2 AC135983.2-203ENST00000454486 1613 ntBASIC27■■□□□ 1.91
RCCD1A6NED2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RCCD1A6NED2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RCCD1A6NED2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.99■■□□□ 1.91
RCCD1A6NED2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RCCD1A6NED2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.97■■□□□ 1.91
RCCD1A6NED2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
RCCD1A6NED2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.96■■□□□ 1.91
RCCD1A6NED2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RCCD1A6NED2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
RCCD1A6NED2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.95■■□□□ 1.91
RCCD1A6NED2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RCCD1A6NED2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RCCD1A6NED2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.95■■□□□ 1.9
RCCD1A6NED2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.95■■□□□ 1.9
RCCD1A6NED2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 AC091060.1-201ENST00000623524 1766 ntBASIC26.94■■□□□ 1.9
RCCD1A6NED2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RCCD1A6NED2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 AC018358.1-201ENST00000631079 1402 ntBASIC26.93■■□□□ 1.9
RCCD1A6NED2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RCCD1A6NED2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RCCD1A6NED2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RCCD1A6NED2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.9■■□□□ 1.9
RCCD1A6NED2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RCCD1A6NED2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms