Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.14■■□□□ 1.93
RCCD1A6NED2 AP002414.2-202ENST00000590929 1450 ntBASIC27.13■■□□□ 1.93
RCCD1A6NED2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RCCD1A6NED2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.13■■□□□ 1.93
RCCD1A6NED2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.12■■□□□ 1.93
RCCD1A6NED2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RCCD1A6NED2 AC135731.1-201ENST00000569415 2548 ntBASIC27.11■■□□□ 1.93
RCCD1A6NED2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RCCD1A6NED2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.1■■□□□ 1.93
RCCD1A6NED2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
RCCD1A6NED2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RCCD1A6NED2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RCCD1A6NED2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RCCD1A6NED2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
RCCD1A6NED2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.08■■□□□ 1.93
RCCD1A6NED2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.08■■□□□ 1.93
RCCD1A6NED2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RCCD1A6NED2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RCCD1A6NED2 AL449106.1-201ENST00000608517 1980 ntBASIC27.07■■□□□ 1.92
RCCD1A6NED2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
RCCD1A6NED2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.06■■□□□ 1.92
RCCD1A6NED2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RCCD1A6NED2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RCCD1A6NED2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.05■■□□□ 1.92
RCCD1A6NED2 MIR762-201ENST00000390236 83 ntBASIC27.05■■□□□ 1.92
RCCD1A6NED2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RCCD1A6NED2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
RCCD1A6NED2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RCCD1A6NED2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
RCCD1A6NED2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.02■■□□□ 1.92
RCCD1A6NED2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RCCD1A6NED2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RCCD1A6NED2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RCCD1A6NED2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27■■□□□ 1.91
RCCD1A6NED2 AC135983.2-203ENST00000454486 1613 ntBASIC27■■□□□ 1.91
RCCD1A6NED2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RCCD1A6NED2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RCCD1A6NED2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.99■■□□□ 1.91
RCCD1A6NED2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RCCD1A6NED2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
RCCD1A6NED2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RCCD1A6NED2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.97■■□□□ 1.91
RCCD1A6NED2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RCCD1A6NED2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
RCCD1A6NED2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.96■■□□□ 1.91
RCCD1A6NED2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RCCD1A6NED2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
RCCD1A6NED2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.95■■□□□ 1.91
RCCD1A6NED2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RCCD1A6NED2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RCCD1A6NED2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.95■■□□□ 1.9
RCCD1A6NED2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.95■■□□□ 1.9
RCCD1A6NED2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 AC091060.1-201ENST00000623524 1766 ntBASIC26.94■■□□□ 1.9
RCCD1A6NED2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RCCD1A6NED2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.94■■□□□ 1.9
RCCD1A6NED2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 AC018358.1-201ENST00000631079 1402 ntBASIC26.93■■□□□ 1.9
RCCD1A6NED2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RCCD1A6NED2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RCCD1A6NED2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RCCD1A6NED2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RCCD1A6NED2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.91■■□□□ 1.9
RCCD1A6NED2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RCCD1A6NED2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RCCD1A6NED2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.9■■□□□ 1.9
RCCD1A6NED2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RCCD1A6NED2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms