Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
TRGV4A0A0C4DH28 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRGV4A0A0C4DH28 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRGV4A0A0C4DH28 AC135983.2-203ENST00000454486 1613 ntBASIC18.1■□□□□ 0.49
TRGV4A0A0C4DH28 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.1■□□□□ 0.49
TRGV4A0A0C4DH28 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRGV4A0A0C4DH28 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV4A0A0C4DH28 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRGV4A0A0C4DH28 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRGV4A0A0C4DH28 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.08■□□□□ 0.49
TRGV4A0A0C4DH28 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 WHAMMP2-203ENST00000563942 1603 ntBASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRGV4A0A0C4DH28 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRGV4A0A0C4DH28 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV4A0A0C4DH28 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV4A0A0C4DH28 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV4A0A0C4DH28 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV4A0A0C4DH28 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRGV4A0A0C4DH28 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 AC021231.2-201ENST00000594613 730 ntBASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV4A0A0C4DH28 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.03■□□□□ 0.48
TRGV4A0A0C4DH28 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV4A0A0C4DH28 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV4A0A0C4DH28 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.02■□□□□ 0.48
TRGV4A0A0C4DH28 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV4A0A0C4DH28 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV4A0A0C4DH28 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV4A0A0C4DH28 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV4A0A0C4DH28 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 AP002414.2-202ENST00000590929 1450 ntBASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV4A0A0C4DH28 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV4A0A0C4DH28 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV4A0A0C4DH28 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRGV4A0A0C4DH28 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV4A0A0C4DH28 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV4A0A0C4DH28 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV4A0A0C4DH28 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV4A0A0C4DH28 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV4A0A0C4DH28 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV4A0A0C4DH28 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV4A0A0C4DH28 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV4A0A0C4DH28 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms