Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 AC100797.4-201ENST00000631653 1827 ntBASIC28.75■■■□□ 2.19
PCDHA5Q9Y5H7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHA5Q9Y5H7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHA5Q9Y5H7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
PCDHA5Q9Y5H7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.73■■■□□ 2.19
PCDHA5Q9Y5H7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCDHA5Q9Y5H7 BX255925.1-201ENST00000566954 1854 ntBASIC28.73■■■□□ 2.19
PCDHA5Q9Y5H7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.72■■■□□ 2.19
PCDHA5Q9Y5H7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA5Q9Y5H7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA5Q9Y5H7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHA5Q9Y5H7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHA5Q9Y5H7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.69■■■□□ 2.18
PCDHA5Q9Y5H7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.69■■■□□ 2.18
PCDHA5Q9Y5H7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.69■■■□□ 2.18
PCDHA5Q9Y5H7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHA5Q9Y5H7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
PCDHA5Q9Y5H7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHA5Q9Y5H7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHA5Q9Y5H7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHA5Q9Y5H7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.67■■■□□ 2.18
PCDHA5Q9Y5H7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHA5Q9Y5H7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHA5Q9Y5H7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA5Q9Y5H7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHA5Q9Y5H7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHA5Q9Y5H7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHA5Q9Y5H7 AC005559.1-201ENST00000589661 871 ntBASIC28.64■■■□□ 2.18
PCDHA5Q9Y5H7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
PCDHA5Q9Y5H7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.63■■■□□ 2.17
PCDHA5Q9Y5H7 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 LINC01003-201ENST00000564834 1764 ntBASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA5Q9Y5H7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.61■■■□□ 2.17
PCDHA5Q9Y5H7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA5Q9Y5H7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.6■■■□□ 2.17
PCDHA5Q9Y5H7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA5Q9Y5H7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA5Q9Y5H7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA5Q9Y5H7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA5Q9Y5H7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
PCDHA5Q9Y5H7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
PCDHA5Q9Y5H7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA5Q9Y5H7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
PCDHA5Q9Y5H7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA5Q9Y5H7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
PCDHA5Q9Y5H7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.56■■■□□ 2.16
PCDHA5Q9Y5H7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.56■■■□□ 2.16
PCDHA5Q9Y5H7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
PCDHA5Q9Y5H7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.55■■■□□ 2.16
PCDHA5Q9Y5H7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.55■■■□□ 2.16
PCDHA5Q9Y5H7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDHA5Q9Y5H7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA5Q9Y5H7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA5Q9Y5H7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.53■■■□□ 2.16
PCDHA5Q9Y5H7 AC135983.2-203ENST00000454486 1613 ntBASIC28.53■■■□□ 2.16
PCDHA5Q9Y5H7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA5Q9Y5H7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.53■■■□□ 2.16
PCDHA5Q9Y5H7 MIR6090-201ENST00000622481 60 ntBASIC28.52■■■□□ 2.16
PCDHA5Q9Y5H7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PCDHA5Q9Y5H7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.52■■■□□ 2.16
PCDHA5Q9Y5H7 AP002414.2-202ENST00000590929 1450 ntBASIC28.52■■■□□ 2.16
PCDHA5Q9Y5H7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHA5Q9Y5H7 DUX4L28-201ENST00000623687 678 ntBASIC28.51■■■□□ 2.15
PCDHA5Q9Y5H7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
PCDHA5Q9Y5H7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA5Q9Y5H7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA5Q9Y5H7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.49■■■□□ 2.15
PCDHA5Q9Y5H7 AC108673.1-201ENST00000510422 1159 ntBASIC28.49■■■□□ 2.15
PCDHA5Q9Y5H7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.49■■■□□ 2.15
PCDHA5Q9Y5H7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms