Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
EBF3Q9H4W6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.79■■□□□ 1.88
EBF3Q9H4W6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
EBF3Q9H4W6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
EBF3Q9H4W6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
EBF3Q9H4W6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
EBF3Q9H4W6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
EBF3Q9H4W6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
EBF3Q9H4W6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.77■■□□□ 1.88
EBF3Q9H4W6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
EBF3Q9H4W6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.76■■□□□ 1.87
EBF3Q9H4W6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.76■■□□□ 1.87
EBF3Q9H4W6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
EBF3Q9H4W6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
EBF3Q9H4W6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.75■■□□□ 1.87
EBF3Q9H4W6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
EBF3Q9H4W6 AC127502.1-201ENST00000399971 1502 ntBASIC26.75■■□□□ 1.87
EBF3Q9H4W6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
EBF3Q9H4W6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
EBF3Q9H4W6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
EBF3Q9H4W6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
EBF3Q9H4W6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
EBF3Q9H4W6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
EBF3Q9H4W6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.72■■□□□ 1.87
EBF3Q9H4W6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
EBF3Q9H4W6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
EBF3Q9H4W6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
EBF3Q9H4W6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
EBF3Q9H4W6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
EBF3Q9H4W6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
EBF3Q9H4W6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.68■■□□□ 1.86
EBF3Q9H4W6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.67■■□□□ 1.86
EBF3Q9H4W6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
EBF3Q9H4W6 AL135925.1-201ENST00000605920 1701 ntBASIC26.66■■□□□ 1.86
EBF3Q9H4W6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.66■■□□□ 1.86
EBF3Q9H4W6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
EBF3Q9H4W6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
EBF3Q9H4W6 WHAMMP2-203ENST00000563942 1603 ntBASIC26.65■■□□□ 1.86
EBF3Q9H4W6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
EBF3Q9H4W6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
EBF3Q9H4W6 GPX1-201ENST00000419349 1106 ntBASIC26.65■■□□□ 1.86
EBF3Q9H4W6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
EBF3Q9H4W6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
EBF3Q9H4W6 AC135983.2-203ENST00000454486 1613 ntBASIC26.65■■□□□ 1.86
EBF3Q9H4W6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.64■■□□□ 1.86
EBF3Q9H4W6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
EBF3Q9H4W6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
EBF3Q9H4W6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.63■■□□□ 1.85
EBF3Q9H4W6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
EBF3Q9H4W6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
EBF3Q9H4W6 RARRES2P2-201ENST00000394842 485 ntBASIC26.62■■□□□ 1.85
EBF3Q9H4W6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
EBF3Q9H4W6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
EBF3Q9H4W6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.61■■□□□ 1.85
EBF3Q9H4W6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
EBF3Q9H4W6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
EBF3Q9H4W6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.6■■□□□ 1.85
EBF3Q9H4W6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.6■■□□□ 1.85
EBF3Q9H4W6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
EBF3Q9H4W6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
EBF3Q9H4W6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
EBF3Q9H4W6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
EBF3Q9H4W6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.57■■□□□ 1.84
EBF3Q9H4W6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.57■■□□□ 1.84
EBF3Q9H4W6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
EBF3Q9H4W6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
EBF3Q9H4W6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.55■■□□□ 1.84
EBF3Q9H4W6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.54■■□□□ 1.84
EBF3Q9H4W6 AC008813.1-201ENST00000536597 885 ntBASIC26.54■■□□□ 1.84
EBF3Q9H4W6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
EBF3Q9H4W6 RNF126P1-201ENST00000567452 1320 ntBASIC26.53■■□□□ 1.84
EBF3Q9H4W6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
EBF3Q9H4W6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
EBF3Q9H4W6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.52■■□□□ 1.84
EBF3Q9H4W6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.52■■□□□ 1.84
EBF3Q9H4W6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.52■■□□□ 1.84
EBF3Q9H4W6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
EBF3Q9H4W6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
EBF3Q9H4W6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
EBF3Q9H4W6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.51■■□□□ 1.83
EBF3Q9H4W6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
EBF3Q9H4W6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
EBF3Q9H4W6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
EBF3Q9H4W6 ABHD17AP5-201ENST00000580133 923 ntBASIC26.5■■□□□ 1.83
EBF3Q9H4W6 AC022413.1-201ENST00000624602 984 ntBASIC26.5■■□□□ 1.83
EBF3Q9H4W6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
EBF3Q9H4W6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
EBF3Q9H4W6 AC110285.7-201ENST00000624417 1536 ntBASIC26.49■■□□□ 1.83
EBF3Q9H4W6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.49■■□□□ 1.83
EBF3Q9H4W6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms