Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM4CQ9H3R0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM4CQ9H3R0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KDM4CQ9H3R0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.52■■□□□ 1.84
KDM4CQ9H3R0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
KDM4CQ9H3R0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
KDM4CQ9H3R0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
KDM4CQ9H3R0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KDM4CQ9H3R0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM4CQ9H3R0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.48■■□□□ 1.83
KDM4CQ9H3R0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KDM4CQ9H3R0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.47■■□□□ 1.83
KDM4CQ9H3R0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KDM4CQ9H3R0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KDM4CQ9H3R0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
KDM4CQ9H3R0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 AL121749.1-202ENST00000609313 2153 ntBASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM4CQ9H3R0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
KDM4CQ9H3R0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
KDM4CQ9H3R0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
KDM4CQ9H3R0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
KDM4CQ9H3R0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.45■■□□□ 1.82
KDM4CQ9H3R0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
KDM4CQ9H3R0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.44■■□□□ 1.82
KDM4CQ9H3R0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
KDM4CQ9H3R0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.44■■□□□ 1.82
KDM4CQ9H3R0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KDM4CQ9H3R0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM4CQ9H3R0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM4CQ9H3R0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
KDM4CQ9H3R0 LINC01971-201ENST00000617888 1048 ntBASIC26.42■■□□□ 1.82
KDM4CQ9H3R0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KDM4CQ9H3R0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
KDM4CQ9H3R0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM4CQ9H3R0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM4CQ9H3R0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.4■■□□□ 1.82
KDM4CQ9H3R0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.4■■□□□ 1.82
KDM4CQ9H3R0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KDM4CQ9H3R0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM4CQ9H3R0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KDM4CQ9H3R0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM4CQ9H3R0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.38■■□□□ 1.81
KDM4CQ9H3R0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KDM4CQ9H3R0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.38■■□□□ 1.81
KDM4CQ9H3R0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KDM4CQ9H3R0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.37■■□□□ 1.81
KDM4CQ9H3R0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM4CQ9H3R0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
KDM4CQ9H3R0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.36■■□□□ 1.81
KDM4CQ9H3R0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
KDM4CQ9H3R0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.35■■□□□ 1.81
KDM4CQ9H3R0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KDM4CQ9H3R0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
KDM4CQ9H3R0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KDM4CQ9H3R0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KDM4CQ9H3R0 DUX4L11-201ENST00000611504 1267 ntBASIC26.34■■□□□ 1.81
KDM4CQ9H3R0 DUX4L12-201ENST00000614593 1267 ntBASIC26.34■■□□□ 1.81
KDM4CQ9H3R0 DUX4L14-201ENST00000621227 1267 ntBASIC26.34■■□□□ 1.81
KDM4CQ9H3R0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KDM4CQ9H3R0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.33■■□□□ 1.81
KDM4CQ9H3R0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.33■■□□□ 1.81
KDM4CQ9H3R0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KDM4CQ9H3R0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KDM4CQ9H3R0 MIR639-201ENST00000384974 98 ntBASIC26.32■■□□□ 1.8
KDM4CQ9H3R0 MIR3648-2-201ENST00000581792 180 ntBASIC26.32■■□□□ 1.8
KDM4CQ9H3R0 MIR3648-1-201ENST00000615959 180 ntBASIC26.32■■□□□ 1.8
KDM4CQ9H3R0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
KDM4CQ9H3R0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM4CQ9H3R0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM4CQ9H3R0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.31■■□□□ 1.8
KDM4CQ9H3R0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KDM4CQ9H3R0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KDM4CQ9H3R0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.3■■□□□ 1.8
KDM4CQ9H3R0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
KDM4CQ9H3R0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM4CQ9H3R0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KDM4CQ9H3R0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM4CQ9H3R0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.29■■□□□ 1.8
KDM4CQ9H3R0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms