Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHRDQ9H2X0 AL033527.3-201ENST00000566366 1196 ntBASIC26.24■■□□□ 1.79
CHRDQ9H2X0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CHRDQ9H2X0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 AC018358.1-201ENST00000631079 1402 ntBASIC26.22■■□□□ 1.79
CHRDQ9H2X0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 U85056.1-201ENST00000616429 682 ntBASIC26.21■■□□□ 1.79
CHRDQ9H2X0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHRDQ9H2X0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHRDQ9H2X0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 AC060814.1-201ENST00000554326 538 ntBASIC26.18■■□□□ 1.78
CHRDQ9H2X0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHRDQ9H2X0 AC135983.2-203ENST00000454486 1613 ntBASIC26.17■■□□□ 1.78
CHRDQ9H2X0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHRDQ9H2X0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.16■■□□□ 1.78
CHRDQ9H2X0 AC148477.6-201ENST00000623746 465 ntBASIC26.16■■□□□ 1.78
CHRDQ9H2X0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CHRDQ9H2X0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.15■■□□□ 1.78
CHRDQ9H2X0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
CHRDQ9H2X0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHRDQ9H2X0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHRDQ9H2X0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 AC127502.1-201ENST00000399971 1502 ntBASIC26.13■■□□□ 1.77
CHRDQ9H2X0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHRDQ9H2X0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHRDQ9H2X0 TSPY13P-201ENST00000338964 914 ntBASIC26.08■■□□□ 1.77
CHRDQ9H2X0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 AC110285.7-201ENST00000624417 1536 ntBASIC26.08■■□□□ 1.77
CHRDQ9H2X0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHRDQ9H2X0 KRT18P60-201ENST00000312876 1297 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 AC092296.2-201ENST00000589470 999 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 AC004987.1-201ENST00000428627 508 ntBASIC26.04■■□□□ 1.76
CHRDQ9H2X0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 ATP5G2P3-201ENST00000429083 425 ntBASIC26.03■■□□□ 1.76
CHRDQ9H2X0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 MIR219A2-201ENST00000608502 1504 ntBASIC26■■□□□ 1.75
CHRDQ9H2X0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHRDQ9H2X0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26■■□□□ 1.75
CHRDQ9H2X0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CHRDQ9H2X0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHRDQ9H2X0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.99■■□□□ 1.75
CHRDQ9H2X0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHRDQ9H2X0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.98■■□□□ 1.75
CHRDQ9H2X0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.98■■□□□ 1.75
CHRDQ9H2X0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHRDQ9H2X0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms