Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
CHRDQ9H2X0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.07■■■■□ 3.2
CHRDQ9H2X0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.59■■■■□ 3.13
CHRDQ9H2X0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHRDQ9H2X0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CHRDQ9H2X0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
CHRDQ9H2X0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHRDQ9H2X0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
CHRDQ9H2X0 AL356512.1-201ENST00000607453 1739 ntBASIC33.45■■■□□ 2.95
CHRDQ9H2X0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.43■■■□□ 2.94
CHRDQ9H2X0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
CHRDQ9H2X0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CHRDQ9H2X0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.19■■■□□ 2.9
CHRDQ9H2X0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.18■■■□□ 2.9
CHRDQ9H2X0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHRDQ9H2X0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHRDQ9H2X0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.82■■■□□ 2.85
CHRDQ9H2X0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHRDQ9H2X0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHRDQ9H2X0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHRDQ9H2X0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CHRDQ9H2X0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.42■■■□□ 2.78
CHRDQ9H2X0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
CHRDQ9H2X0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHRDQ9H2X0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHRDQ9H2X0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
CHRDQ9H2X0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
CHRDQ9H2X0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.19■■■□□ 2.74
CHRDQ9H2X0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.16■■■□□ 2.74
CHRDQ9H2X0 ZNRF2P1-201ENST00000441407 443 ntBASIC31.99■■■□□ 2.71
CHRDQ9H2X0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHRDQ9H2X0 AC006077.2-201ENST00000623591 457 ntBASIC31.98■■■□□ 2.71
CHRDQ9H2X0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.89■■■□□ 2.7
CHRDQ9H2X0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.89■■■□□ 2.7
CHRDQ9H2X0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.78■■■□□ 2.68
CHRDQ9H2X0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.73■■■□□ 2.67
CHRDQ9H2X0 AC015813.7-201ENST00000623294 581 ntBASIC31.7■■■□□ 2.67
CHRDQ9H2X0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHRDQ9H2X0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHRDQ9H2X0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHRDQ9H2X0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.31■■■□□ 2.6
CHRDQ9H2X0 AP002365.1-201ENST00000603448 772 ntBASIC31.17■■■□□ 2.58
CHRDQ9H2X0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHRDQ9H2X0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHRDQ9H2X0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHRDQ9H2X0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHRDQ9H2X0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHRDQ9H2X0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.98■■■□□ 2.55
CHRDQ9H2X0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHRDQ9H2X0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHRDQ9H2X0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHRDQ9H2X0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.92■■■□□ 2.54
CHRDQ9H2X0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.9■■■□□ 2.54
CHRDQ9H2X0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CHRDQ9H2X0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.86■■■□□ 2.53
CHRDQ9H2X0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CHRDQ9H2X0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.78■■■□□ 2.52
CHRDQ9H2X0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHRDQ9H2X0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.74■■■□□ 2.51
CHRDQ9H2X0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CHRDQ9H2X0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHRDQ9H2X0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.73■■■□□ 2.51
CHRDQ9H2X0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHRDQ9H2X0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.61■■■□□ 2.49
CHRDQ9H2X0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.57■■■□□ 2.48
CHRDQ9H2X0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
CHRDQ9H2X0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.55■■■□□ 2.48
CHRDQ9H2X0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHRDQ9H2X0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CHRDQ9H2X0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHRDQ9H2X0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHRDQ9H2X0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.45■■■□□ 2.47
CHRDQ9H2X0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHRDQ9H2X0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHRDQ9H2X0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHRDQ9H2X0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHRDQ9H2X0 DYNLL1-208ENST00000550178 581 ntBASIC30.38■■■□□ 2.45
CHRDQ9H2X0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHRDQ9H2X0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHRDQ9H2X0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.33■■■□□ 2.45
CHRDQ9H2X0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
CHRDQ9H2X0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CHRDQ9H2X0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHRDQ9H2X0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.26■■■□□ 2.43
CHRDQ9H2X0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.26■■■□□ 2.43
CHRDQ9H2X0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHRDQ9H2X0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHRDQ9H2X0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHRDQ9H2X0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CHRDQ9H2X0 AL031258.1-201ENST00000623562 325 ntBASIC30.14■■■□□ 2.42
CHRDQ9H2X0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRDQ9H2X0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHRDQ9H2X0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.05■■■□□ 2.4
CHRDQ9H2X0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.03■■■□□ 2.4
CHRDQ9H2X0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.03■■■□□ 2.4
CHRDQ9H2X0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRDQ9H2X0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.02■■■□□ 2.4
CHRDQ9H2X0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CHRDQ9H2X0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
CHRDQ9H2X0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms