Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC6.9□□□□□ -1.3
LCE3DQ9BYE3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LCE3DQ9BYE3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LCE3DQ9BYE3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LCE3DQ9BYE3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LCE3DQ9BYE3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LCE3DQ9BYE3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LCE3DQ9BYE3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
LCE3DQ9BYE3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
LCE3DQ9BYE3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LCE3DQ9BYE3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 BX255925.1-201ENST00000566954 1854 ntBASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LCE3DQ9BYE3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC6.86□□□□□ -1.31
LCE3DQ9BYE3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
LCE3DQ9BYE3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC6.84□□□□□ -1.31
LCE3DQ9BYE3 AL449106.1-201ENST00000608517 1980 ntBASIC6.84□□□□□ -1.32
LCE3DQ9BYE3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
LCE3DQ9BYE3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
LCE3DQ9BYE3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
LCE3DQ9BYE3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
LCE3DQ9BYE3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LCE3DQ9BYE3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms