Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.95■■□□□ 1.42
MS4A4EQ96PG1 LINC00273-201ENST00000539813 1452 ntBASIC23.94■■□□□ 1.42
MS4A4EQ96PG1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
MS4A4EQ96PG1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.94■■□□□ 1.42
MS4A4EQ96PG1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
MS4A4EQ96PG1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MS4A4EQ96PG1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MS4A4EQ96PG1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
MS4A4EQ96PG1 AC135983.2-203ENST00000454486 1613 ntBASIC23.93■■□□□ 1.42
MS4A4EQ96PG1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MS4A4EQ96PG1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MS4A4EQ96PG1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
MS4A4EQ96PG1 AC100797.4-201ENST00000631653 1827 ntBASIC23.91■■□□□ 1.42
MS4A4EQ96PG1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
MS4A4EQ96PG1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
MS4A4EQ96PG1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
MS4A4EQ96PG1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MS4A4EQ96PG1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.9■■□□□ 1.42
MS4A4EQ96PG1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.9■■□□□ 1.42
MS4A4EQ96PG1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MS4A4EQ96PG1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.9■■□□□ 1.42
MS4A4EQ96PG1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MS4A4EQ96PG1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.89■■□□□ 1.42
MS4A4EQ96PG1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MS4A4EQ96PG1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MS4A4EQ96PG1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.89■■□□□ 1.41
MS4A4EQ96PG1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
MS4A4EQ96PG1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
MS4A4EQ96PG1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.88■■□□□ 1.41
MS4A4EQ96PG1 WHAMMP2-203ENST00000563942 1603 ntBASIC23.88■■□□□ 1.41
MS4A4EQ96PG1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MS4A4EQ96PG1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.87■■□□□ 1.41
MS4A4EQ96PG1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
MS4A4EQ96PG1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.85■■□□□ 1.41
MS4A4EQ96PG1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.84■■□□□ 1.41
MS4A4EQ96PG1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.83■■□□□ 1.41
MS4A4EQ96PG1 RPS2P35-201ENST00000443417 897 ntBASIC23.83■■□□□ 1.41
MS4A4EQ96PG1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
MS4A4EQ96PG1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MS4A4EQ96PG1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.83■■□□□ 1.4
MS4A4EQ96PG1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MS4A4EQ96PG1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.82■■□□□ 1.4
MS4A4EQ96PG1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MS4A4EQ96PG1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.82■■□□□ 1.4
MS4A4EQ96PG1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.81■■□□□ 1.4
MS4A4EQ96PG1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MS4A4EQ96PG1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
MS4A4EQ96PG1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
MS4A4EQ96PG1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.8■■□□□ 1.4
MS4A4EQ96PG1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.8■■□□□ 1.4
MS4A4EQ96PG1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MS4A4EQ96PG1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MS4A4EQ96PG1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MS4A4EQ96PG1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MS4A4EQ96PG1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MS4A4EQ96PG1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MS4A4EQ96PG1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MS4A4EQ96PG1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MS4A4EQ96PG1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MS4A4EQ96PG1 AP002414.2-202ENST00000590929 1450 ntBASIC23.77■■□□□ 1.4
MS4A4EQ96PG1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.77■■□□□ 1.4
MS4A4EQ96PG1 AC021231.2-201ENST00000594613 730 ntBASIC23.77■■□□□ 1.4
MS4A4EQ96PG1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MS4A4EQ96PG1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MS4A4EQ96PG1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MS4A4EQ96PG1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.76■■□□□ 1.39
MS4A4EQ96PG1 DUX4L29-201ENST00000425409 679 ntBASIC23.76■■□□□ 1.39
MS4A4EQ96PG1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MS4A4EQ96PG1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MS4A4EQ96PG1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MS4A4EQ96PG1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MS4A4EQ96PG1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MS4A4EQ96PG1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MS4A4EQ96PG1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
MS4A4EQ96PG1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MS4A4EQ96PG1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MS4A4EQ96PG1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MS4A4EQ96PG1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MS4A4EQ96PG1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MS4A4EQ96PG1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms