Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.48■■□□□ 1.99
DDX1Q92499 AC142086.6-201ENST00000621154 1765 ntBASIC27.48■■□□□ 1.99
DDX1Q92499 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
DDX1Q92499 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.47■■□□□ 1.99
DDX1Q92499 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
DDX1Q92499 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX1Q92499 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX1Q92499 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.46■■□□□ 1.99
DDX1Q92499 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
DDX1Q92499 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DDX1Q92499 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DDX1Q92499 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
DDX1Q92499 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
DDX1Q92499 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX1Q92499 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX1Q92499 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX1Q92499 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
DDX1Q92499 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.42■■□□□ 1.98
DDX1Q92499 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.42■■□□□ 1.98
DDX1Q92499 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.42■■□□□ 1.98
DDX1Q92499 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
DDX1Q92499 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
DDX1Q92499 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.41■■□□□ 1.98
DDX1Q92499 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
DDX1Q92499 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.41■■□□□ 1.98
DDX1Q92499 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
DDX1Q92499 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
DDX1Q92499 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
DDX1Q92499 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
DDX1Q92499 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
DDX1Q92499 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
DDX1Q92499 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.39■■□□□ 1.98
DDX1Q92499 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
DDX1Q92499 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
DDX1Q92499 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
DDX1Q92499 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
DDX1Q92499 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX1Q92499 AC100797.4-201ENST00000631653 1827 ntBASIC27.38■■□□□ 1.97
DDX1Q92499 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DDX1Q92499 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DDX1Q92499 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX1Q92499 AC135983.2-203ENST00000454486 1613 ntBASIC27.38■■□□□ 1.97
DDX1Q92499 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.37■■□□□ 1.97
DDX1Q92499 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DDX1Q92499 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DDX1Q92499 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.37■■□□□ 1.97
DDX1Q92499 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX1Q92499 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX1Q92499 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.36■■□□□ 1.97
DDX1Q92499 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.36■■□□□ 1.97
DDX1Q92499 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX1Q92499 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.35■■□□□ 1.97
DDX1Q92499 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.35■■□□□ 1.97
DDX1Q92499 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
DDX1Q92499 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX1Q92499 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
DDX1Q92499 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX1Q92499 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX1Q92499 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX1Q92499 LINC00273-201ENST00000539813 1452 ntBASIC27.33■■□□□ 1.97
DDX1Q92499 MIR4449-201ENST00000578365 66 ntBASIC27.33■■□□□ 1.97
DDX1Q92499 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX1Q92499 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.33■■□□□ 1.96
DDX1Q92499 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.96
DDX1Q92499 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX1Q92499 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DDX1Q92499 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX1Q92499 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX1Q92499 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX1Q92499 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
DDX1Q92499 WHAMMP2-203ENST00000563942 1603 ntBASIC27.31■■□□□ 1.96
DDX1Q92499 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
DDX1Q92499 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.31■■□□□ 1.96
DDX1Q92499 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX1Q92499 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX1Q92499 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX1Q92499 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX1Q92499 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.29■■□□□ 1.96
DDX1Q92499 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.28■■□□□ 1.96
DDX1Q92499 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.28■■□□□ 1.96
DDX1Q92499 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
DDX1Q92499 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.28■■□□□ 1.96
DDX1Q92499 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX1Q92499 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
DDX1Q92499 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX1Q92499 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX1Q92499 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX1Q92499 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.26■■□□□ 1.95
DDX1Q92499 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.26■■□□□ 1.95
DDX1Q92499 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX1Q92499 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
DDX1Q92499 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.25■■□□□ 1.95
DDX1Q92499 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.25■■□□□ 1.95
DDX1Q92499 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DDX1Q92499 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.25■■□□□ 1.95
DDX1Q92499 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX1Q92499 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DDX1Q92499 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX1Q92499 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX1Q92499 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms