Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD2Q8WV60 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD2Q8WV60 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PTCD2Q8WV60 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD2Q8WV60 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD2Q8WV60 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCD2Q8WV60 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PTCD2Q8WV60 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD2Q8WV60 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
PTCD2Q8WV60 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD2Q8WV60 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD2Q8WV60 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.95■■□□□ 1.74
PTCD2Q8WV60 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCD2Q8WV60 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.95■■□□□ 1.74
PTCD2Q8WV60 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD2Q8WV60 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD2Q8WV60 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.94■■□□□ 1.74
PTCD2Q8WV60 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.94■■□□□ 1.74
PTCD2Q8WV60 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
PTCD2Q8WV60 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.93■■□□□ 1.74
PTCD2Q8WV60 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.93■■□□□ 1.74
PTCD2Q8WV60 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.93■■□□□ 1.74
PTCD2Q8WV60 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD2Q8WV60 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD2Q8WV60 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.91■■□□□ 1.74
PTCD2Q8WV60 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD2Q8WV60 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.9■■□□□ 1.74
PTCD2Q8WV60 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCD2Q8WV60 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PTCD2Q8WV60 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
PTCD2Q8WV60 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.88■■□□□ 1.73
PTCD2Q8WV60 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD2Q8WV60 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCD2Q8WV60 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.87■■□□□ 1.73
PTCD2Q8WV60 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD2Q8WV60 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD2Q8WV60 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTCD2Q8WV60 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.86■■□□□ 1.73
PTCD2Q8WV60 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD2Q8WV60 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD2Q8WV60 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCD2Q8WV60 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PTCD2Q8WV60 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PTCD2Q8WV60 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCD2Q8WV60 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCD2Q8WV60 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.83■■□□□ 1.73
PTCD2Q8WV60 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTCD2Q8WV60 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.83■■□□□ 1.73
PTCD2Q8WV60 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
PTCD2Q8WV60 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
PTCD2Q8WV60 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD2Q8WV60 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PTCD2Q8WV60 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.81■■□□□ 1.72
PTCD2Q8WV60 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD2Q8WV60 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PTCD2Q8WV60 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD2Q8WV60 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTCD2Q8WV60 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PTCD2Q8WV60 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PTCD2Q8WV60 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.78■■□□□ 1.72
PTCD2Q8WV60 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD2Q8WV60 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD2Q8WV60 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD2Q8WV60 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD2Q8WV60 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCD2Q8WV60 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PTCD2Q8WV60 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.76■■□□□ 1.71
PTCD2Q8WV60 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD2Q8WV60 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD2Q8WV60 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD2Q8WV60 AC100797.4-201ENST00000631653 1827 ntBASIC25.75■■□□□ 1.71
PTCD2Q8WV60 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD2Q8WV60 AC135983.2-203ENST00000454486 1613 ntBASIC25.75■■□□□ 1.71
PTCD2Q8WV60 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD2Q8WV60 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD2Q8WV60 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.74■■□□□ 1.71
PTCD2Q8WV60 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD2Q8WV60 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PTCD2Q8WV60 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PTCD2Q8WV60 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
PTCD2Q8WV60 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.73■■□□□ 1.71
PTCD2Q8WV60 LINC00273-201ENST00000539813 1452 ntBASIC25.72■■□□□ 1.71
PTCD2Q8WV60 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PTCD2Q8WV60 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCD2Q8WV60 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD2Q8WV60 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD2Q8WV60 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD2Q8WV60 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD2Q8WV60 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms