Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ZNF439Q8NDP4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF439Q8NDP4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF439Q8NDP4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF439Q8NDP4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF439Q8NDP4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF439Q8NDP4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF439Q8NDP4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF439Q8NDP4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF439Q8NDP4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF439Q8NDP4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF439Q8NDP4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF439Q8NDP4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF439Q8NDP4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNF439Q8NDP4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF439Q8NDP4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF439Q8NDP4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF439Q8NDP4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF439Q8NDP4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ZNF439Q8NDP4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF439Q8NDP4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF439Q8NDP4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF439Q8NDP4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF439Q8NDP4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF439Q8NDP4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF439Q8NDP4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF439Q8NDP4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21■□□□□ 0.95
ZNF439Q8NDP4 AC135983.2-203ENST00000454486 1613 ntBASIC21■□□□□ 0.95
ZNF439Q8NDP4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF439Q8NDP4 AC044849.2-201ENST00000606596 710 ntBASIC20.99■□□□□ 0.95
ZNF439Q8NDP4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF439Q8NDP4 LINC00273-201ENST00000539813 1452 ntBASIC20.99■□□□□ 0.95
ZNF439Q8NDP4 AC100797.4-201ENST00000631653 1827 ntBASIC20.99■□□□□ 0.95
ZNF439Q8NDP4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF439Q8NDP4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF439Q8NDP4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF439Q8NDP4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF439Q8NDP4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ZNF439Q8NDP4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.97■□□□□ 0.95
ZNF439Q8NDP4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF439Q8NDP4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 WHAMMP2-203ENST00000563942 1603 ntBASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF439Q8NDP4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF439Q8NDP4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF439Q8NDP4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.93■□□□□ 0.94
ZNF439Q8NDP4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF439Q8NDP4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF439Q8NDP4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF439Q8NDP4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF439Q8NDP4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF439Q8NDP4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF439Q8NDP4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF439Q8NDP4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF439Q8NDP4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms