Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 AC100797.4-201ENST00000631653 1827 ntBASIC23.71■■□□□ 1.39
VRK2Q86Y07 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.71■■□□□ 1.39
VRK2Q86Y07 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.71■■□□□ 1.39
VRK2Q86Y07 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.38
VRK2Q86Y07 MIR6090-201ENST00000622481 60 ntBASIC23.7■■□□□ 1.38
VRK2Q86Y07 AC108673.1-201ENST00000510422 1159 ntBASIC23.69■■□□□ 1.38
VRK2Q86Y07 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.69■■□□□ 1.38
VRK2Q86Y07 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VRK2Q86Y07 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VRK2Q86Y07 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.68■■□□□ 1.38
VRK2Q86Y07 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 MIR3665-201ENST00000578708 105 ntBASIC23.68■■□□□ 1.38
VRK2Q86Y07 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.68■■□□□ 1.38
VRK2Q86Y07 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
VRK2Q86Y07 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
VRK2Q86Y07 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
VRK2Q86Y07 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VRK2Q86Y07 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VRK2Q86Y07 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VRK2Q86Y07 AP006261.1-201ENST00000584783 668 ntBASIC23.62■■□□□ 1.37
VRK2Q86Y07 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VRK2Q86Y07 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.62■■□□□ 1.37
VRK2Q86Y07 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRK2Q86Y07 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.61■■□□□ 1.37
VRK2Q86Y07 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
VRK2Q86Y07 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VRK2Q86Y07 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VRK2Q86Y07 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 AC135983.2-203ENST00000454486 1613 ntBASIC23.59■■□□□ 1.37
VRK2Q86Y07 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VRK2Q86Y07 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
VRK2Q86Y07 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRK2Q86Y07 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VRK2Q86Y07 BX255925.1-201ENST00000566954 1854 ntBASIC23.57■■□□□ 1.36
VRK2Q86Y07 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 WHAMMP2-203ENST00000563942 1603 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 AL162393.1-201ENST00000437852 946 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VRK2Q86Y07 AC087741.3-201ENST00000624270 1347 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VRK2Q86Y07 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.54■■□□□ 1.36
VRK2Q86Y07 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
VRK2Q86Y07 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRK2Q86Y07 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRK2Q86Y07 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 LINC00273-201ENST00000539813 1452 ntBASIC23.52■■□□□ 1.36
VRK2Q86Y07 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
VRK2Q86Y07 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 LINC01003-201ENST00000564834 1764 ntBASIC23.51■■□□□ 1.35
VRK2Q86Y07 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
VRK2Q86Y07 AL121749.1-202ENST00000609313 2153 ntBASIC23.51■■□□□ 1.35
VRK2Q86Y07 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.5■■□□□ 1.35
VRK2Q86Y07 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 AP002414.2-202ENST00000590929 1450 ntBASIC23.49■■□□□ 1.35
VRK2Q86Y07 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms