Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHD1LQ86WJ1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CHD1LQ86WJ1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.85■■■□□ 2.69
CHD1LQ86WJ1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHD1LQ86WJ1 AC100797.4-201ENST00000631653 1827 ntBASIC31.84■■■□□ 2.69
CHD1LQ86WJ1 AC108673.1-201ENST00000510422 1159 ntBASIC31.84■■■□□ 2.69
CHD1LQ86WJ1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1LQ86WJ1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1LQ86WJ1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1LQ86WJ1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.83■■■□□ 2.69
CHD1LQ86WJ1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD1LQ86WJ1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.82■■■□□ 2.68
CHD1LQ86WJ1 MIR3665-201ENST00000578708 105 ntBASIC31.82■■■□□ 2.68
CHD1LQ86WJ1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
CHD1LQ86WJ1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CHD1LQ86WJ1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHD1LQ86WJ1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.81■■■□□ 2.68
CHD1LQ86WJ1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD1LQ86WJ1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.79■■■□□ 2.68
CHD1LQ86WJ1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CHD1LQ86WJ1 AP006261.1-201ENST00000584783 668 ntBASIC31.78■■■□□ 2.68
CHD1LQ86WJ1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1LQ86WJ1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
CHD1LQ86WJ1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1LQ86WJ1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CHD1LQ86WJ1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHD1LQ86WJ1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
CHD1LQ86WJ1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1LQ86WJ1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1LQ86WJ1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1LQ86WJ1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1LQ86WJ1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.74■■■□□ 2.67
CHD1LQ86WJ1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1LQ86WJ1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1LQ86WJ1 AC135983.2-203ENST00000454486 1613 ntBASIC31.72■■■□□ 2.67
CHD1LQ86WJ1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1LQ86WJ1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.71■■■□□ 2.67
CHD1LQ86WJ1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.71■■■□□ 2.67
CHD1LQ86WJ1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHD1LQ86WJ1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHD1LQ86WJ1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHD1LQ86WJ1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CHD1LQ86WJ1 AC087741.3-201ENST00000624270 1347 ntBASIC31.7■■■□□ 2.66
CHD1LQ86WJ1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
CHD1LQ86WJ1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.69■■■□□ 2.66
CHD1LQ86WJ1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1LQ86WJ1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.68■■■□□ 2.66
CHD1LQ86WJ1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.68■■■□□ 2.66
CHD1LQ86WJ1 AL162393.1-201ENST00000437852 946 ntBASIC31.68■■■□□ 2.66
CHD1LQ86WJ1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.68■■■□□ 2.66
CHD1LQ86WJ1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHD1LQ86WJ1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHD1LQ86WJ1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.66■■■□□ 2.66
CHD1LQ86WJ1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHD1LQ86WJ1 BX255925.1-201ENST00000566954 1854 ntBASIC31.66■■■□□ 2.66
CHD1LQ86WJ1 WHAMMP2-203ENST00000563942 1603 ntBASIC31.66■■■□□ 2.66
CHD1LQ86WJ1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1LQ86WJ1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHD1LQ86WJ1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHD1LQ86WJ1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHD1LQ86WJ1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
CHD1LQ86WJ1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 LINC00273-201ENST00000539813 1452 ntBASIC31.63■■■□□ 2.65
CHD1LQ86WJ1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.62■■■□□ 2.65
CHD1LQ86WJ1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD1LQ86WJ1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
CHD1LQ86WJ1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHD1LQ86WJ1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
CHD1LQ86WJ1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.61■■■□□ 2.65
CHD1LQ86WJ1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CHD1LQ86WJ1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHD1LQ86WJ1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHD1LQ86WJ1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHD1LQ86WJ1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHD1LQ86WJ1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHD1LQ86WJ1 AP002414.2-202ENST00000590929 1450 ntBASIC31.59■■■□□ 2.65
CHD1LQ86WJ1 LINC01003-201ENST00000564834 1764 ntBASIC31.58■■■□□ 2.65
CHD1LQ86WJ1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHD1LQ86WJ1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHD1LQ86WJ1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.56■■■□□ 2.64
CHD1LQ86WJ1 AL121749.1-202ENST00000609313 2153 ntBASIC31.56■■■□□ 2.64
CHD1LQ86WJ1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CHD1LQ86WJ1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHD1LQ86WJ1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CHD1LQ86WJ1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.55■■■□□ 2.64
CHD1LQ86WJ1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CHD1LQ86WJ1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CHD1LQ86WJ1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CHD1LQ86WJ1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.54■■■□□ 2.64
CHD1LQ86WJ1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD1LQ86WJ1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.53■■■□□ 2.64
CHD1LQ86WJ1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.53■■■□□ 2.64
CHD1LQ86WJ1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD1LQ86WJ1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.52■■■□□ 2.64
CHD1LQ86WJ1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHD1LQ86WJ1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms