Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KRT40Q6A162 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
KRT40Q6A162 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KRT40Q6A162 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KRT40Q6A162 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.75■■■□□ 2.35
KRT40Q6A162 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.75■■■□□ 2.35
KRT40Q6A162 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
KRT40Q6A162 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KRT40Q6A162 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.74■■■□□ 2.35
KRT40Q6A162 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KRT40Q6A162 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.73■■■□□ 2.35
KRT40Q6A162 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT40Q6A162 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
KRT40Q6A162 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KRT40Q6A162 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KRT40Q6A162 AC142086.6-201ENST00000621154 1765 ntBASIC29.71■■■□□ 2.35
KRT40Q6A162 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.71■■■□□ 2.35
KRT40Q6A162 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
KRT40Q6A162 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
KRT40Q6A162 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.7■■■□□ 2.34
KRT40Q6A162 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.34
KRT40Q6A162 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.7■■■□□ 2.34
KRT40Q6A162 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.69■■■□□ 2.34
KRT40Q6A162 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KRT40Q6A162 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KRT40Q6A162 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.68■■■□□ 2.34
KRT40Q6A162 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
KRT40Q6A162 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.68■■■□□ 2.34
KRT40Q6A162 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
KRT40Q6A162 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
KRT40Q6A162 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
KRT40Q6A162 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
KRT40Q6A162 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
KRT40Q6A162 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
KRT40Q6A162 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
KRT40Q6A162 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
KRT40Q6A162 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KRT40Q6A162 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.65■■■□□ 2.34
KRT40Q6A162 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.65■■■□□ 2.34
KRT40Q6A162 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.65■■■□□ 2.34
KRT40Q6A162 AC100797.4-201ENST00000631653 1827 ntBASIC29.65■■■□□ 2.34
KRT40Q6A162 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.65■■■□□ 2.34
KRT40Q6A162 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
KRT40Q6A162 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.34
KRT40Q6A162 AC135983.2-203ENST00000454486 1613 ntBASIC29.64■■■□□ 2.34
KRT40Q6A162 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
KRT40Q6A162 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.63■■■□□ 2.33
KRT40Q6A162 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
KRT40Q6A162 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
KRT40Q6A162 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
KRT40Q6A162 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
KRT40Q6A162 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
KRT40Q6A162 LINC00273-201ENST00000539813 1452 ntBASIC29.61■■■□□ 2.33
KRT40Q6A162 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
KRT40Q6A162 WHAMMP2-203ENST00000563942 1603 ntBASIC29.6■■■□□ 2.33
KRT40Q6A162 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
KRT40Q6A162 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
KRT40Q6A162 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
KRT40Q6A162 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
KRT40Q6A162 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.59■■■□□ 2.33
KRT40Q6A162 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
KRT40Q6A162 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.59■■■□□ 2.33
KRT40Q6A162 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
KRT40Q6A162 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
KRT40Q6A162 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
KRT40Q6A162 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.58■■■□□ 2.33
KRT40Q6A162 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KRT40Q6A162 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KRT40Q6A162 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
KRT40Q6A162 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
KRT40Q6A162 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
KRT40Q6A162 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
KRT40Q6A162 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
KRT40Q6A162 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
KRT40Q6A162 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.56■■■□□ 2.32
KRT40Q6A162 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
KRT40Q6A162 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.56■■■□□ 2.32
KRT40Q6A162 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
KRT40Q6A162 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
KRT40Q6A162 MIR4449-201ENST00000578365 66 ntBASIC29.54■■■□□ 2.32
KRT40Q6A162 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
KRT40Q6A162 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.54■■■□□ 2.32
KRT40Q6A162 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
KRT40Q6A162 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.53■■■□□ 2.32
KRT40Q6A162 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.53■■■□□ 2.32
KRT40Q6A162 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.53■■■□□ 2.32
KRT40Q6A162 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.52■■■□□ 2.32
KRT40Q6A162 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
KRT40Q6A162 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.52■■■□□ 2.32
KRT40Q6A162 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
KRT40Q6A162 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
KRT40Q6A162 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.52■■■□□ 2.32
KRT40Q6A162 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.51■■■□□ 2.31
KRT40Q6A162 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms