Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
NEK4P51957 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.54■■■□□ 2.48
NEK4P51957 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEK4P51957 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEK4P51957 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEK4P51957 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
NEK4P51957 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.53■■■□□ 2.48
NEK4P51957 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NEK4P51957 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NEK4P51957 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.52■■■□□ 2.48
NEK4P51957 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NEK4P51957 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NEK4P51957 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.51■■■□□ 2.47
NEK4P51957 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.51■■■□□ 2.47
NEK4P51957 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
NEK4P51957 BX255925.1-201ENST00000566954 1854 ntBASIC30.5■■■□□ 2.47
NEK4P51957 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NEK4P51957 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NEK4P51957 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NEK4P51957 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.49■■■□□ 2.47
NEK4P51957 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NEK4P51957 AC005559.1-201ENST00000589661 871 ntBASIC30.48■■■□□ 2.47
NEK4P51957 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.48■■■□□ 2.47
NEK4P51957 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NEK4P51957 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NEK4P51957 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.46■■■□□ 2.47
NEK4P51957 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NEK4P51957 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
NEK4P51957 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
NEK4P51957 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
NEK4P51957 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NEK4P51957 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.45■■■□□ 2.47
NEK4P51957 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEK4P51957 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEK4P51957 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NEK4P51957 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NEK4P51957 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.44■■■□□ 2.46
NEK4P51957 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NEK4P51957 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEK4P51957 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NEK4P51957 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NEK4P51957 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
NEK4P51957 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NEK4P51957 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.42■■■□□ 2.46
NEK4P51957 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NEK4P51957 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
NEK4P51957 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
NEK4P51957 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NEK4P51957 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NEK4P51957 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEK4P51957 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEK4P51957 LINC01003-201ENST00000564834 1764 ntBASIC30.39■■■□□ 2.46
NEK4P51957 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEK4P51957 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
NEK4P51957 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
NEK4P51957 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NEK4P51957 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NEK4P51957 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NEK4P51957 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
NEK4P51957 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.37■■■□□ 2.45
NEK4P51957 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.37■■■□□ 2.45
NEK4P51957 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEK4P51957 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEK4P51957 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.37■■■□□ 2.45
NEK4P51957 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEK4P51957 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEK4P51957 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEK4P51957 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
NEK4P51957 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEK4P51957 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
NEK4P51957 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.34■■■□□ 2.45
NEK4P51957 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
NEK4P51957 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEK4P51957 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEK4P51957 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEK4P51957 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEK4P51957 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.33■■■□□ 2.45
NEK4P51957 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEK4P51957 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NEK4P51957 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.32■■■□□ 2.44
NEK4P51957 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.32■■■□□ 2.44
NEK4P51957 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.31■■■□□ 2.44
NEK4P51957 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.31■■■□□ 2.44
NEK4P51957 MIR6090-201ENST00000622481 60 ntBASIC30.31■■■□□ 2.44
NEK4P51957 DUX4L28-201ENST00000623687 678 ntBASIC30.31■■■□□ 2.44
NEK4P51957 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.31■■■□□ 2.44
NEK4P51957 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NEK4P51957 AC108673.1-201ENST00000510422 1159 ntBASIC30.3■■■□□ 2.44
NEK4P51957 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NEK4P51957 AC135983.2-203ENST00000454486 1613 ntBASIC30.29■■■□□ 2.44
NEK4P51957 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NEK4P51957 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
NEK4P51957 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
NEK4P51957 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
NEK4P51957 AP002414.2-202ENST00000590929 1450 ntBASIC30.28■■■□□ 2.44
NEK4P51957 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NEK4P51957 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NEK4P51957 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NEK4P51957 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.27■■■□□ 2.44
NEK4P51957 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms