Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
APOC3P02656 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOC3P02656 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APOC3P02656 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOC3P02656 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOC3P02656 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.81■□□□□ 0.92
APOC3P02656 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOC3P02656 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOC3P02656 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOC3P02656 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
APOC3P02656 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOC3P02656 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOC3P02656 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOC3P02656 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APOC3P02656 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
APOC3P02656 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.78■□□□□ 0.92
APOC3P02656 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
APOC3P02656 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC3P02656 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APOC3P02656 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.77■□□□□ 0.92
APOC3P02656 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.77■□□□□ 0.92
APOC3P02656 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOC3P02656 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOC3P02656 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
APOC3P02656 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
APOC3P02656 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOC3P02656 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOC3P02656 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOC3P02656 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOC3P02656 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOC3P02656 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
APOC3P02656 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
APOC3P02656 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APOC3P02656 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APOC3P02656 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
APOC3P02656 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APOC3P02656 AL139393.2-201ENST00000608721 2025 ntBASIC20.73■□□□□ 0.91
APOC3P02656 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOC3P02656 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.73■□□□□ 0.91
APOC3P02656 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APOC3P02656 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APOC3P02656 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APOC3P02656 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.72■□□□□ 0.91
APOC3P02656 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
APOC3P02656 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.71■□□□□ 0.91
APOC3P02656 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APOC3P02656 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.71■□□□□ 0.91
APOC3P02656 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
APOC3P02656 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
APOC3P02656 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.7■□□□□ 0.9
APOC3P02656 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
APOC3P02656 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.7■□□□□ 0.9
APOC3P02656 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOC3P02656 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC3P02656 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APOC3P02656 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
APOC3P02656 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOC3P02656 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC3P02656 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.67■□□□□ 0.9
APOC3P02656 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC3P02656 BX255925.1-201ENST00000566954 1854 ntBASIC20.67■□□□□ 0.9
APOC3P02656 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC3P02656 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC3P02656 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC3P02656 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC3P02656 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APOC3P02656 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC3P02656 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOC3P02656 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC3P02656 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOC3P02656 AC133561.1-201ENST00000568600 2415 ntBASIC20.65■□□□□ 0.9
APOC3P02656 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC3P02656 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
APOC3P02656 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
APOC3P02656 AC091060.1-201ENST00000623524 1766 ntBASIC20.64■□□□□ 0.9
APOC3P02656 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
APOC3P02656 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.64■□□□□ 0.89
APOC3P02656 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.63■□□□□ 0.89
APOC3P02656 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
APOC3P02656 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOC3P02656 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOC3P02656 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC3P02656 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.62■□□□□ 0.89
APOC3P02656 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOC3P02656 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC3P02656 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.62■□□□□ 0.89
APOC3P02656 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC3P02656 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOC3P02656 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms