Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MT-CO1P00395 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MT-CO1P00395 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L13-201ENST00000554103 1267 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L15-201ENST00000611059 1267 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L23-201ENST00000615195 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L24-201ENST00000617576 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L22-201ENST00000618238 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L20-201ENST00000619712 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L21-201ENST00000622058 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L10-201ENST00000622460 1267 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 DUX4L25-201ENST00000624915 1269 ntBASIC26.28■■□□□ 1.8
MT-CO1P00395 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
MT-CO1P00395 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MT-CO1P00395 ABCB10P3-201ENST00000561950 2166 ntBASIC26.27■■□□□ 1.8
MT-CO1P00395 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.27■■□□□ 1.8
MT-CO1P00395 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MT-CO1P00395 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MT-CO1P00395 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MT-CO1P00395 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
MT-CO1P00395 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MT-CO1P00395 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MT-CO1P00395 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
MT-CO1P00395 AC139426.1-201ENST00000568218 2529 ntBASIC26.25■■□□□ 1.79
MT-CO1P00395 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MT-CO1P00395 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MT-CO1P00395 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.25■■□□□ 1.79
MT-CO1P00395 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.25■■□□□ 1.79
MT-CO1P00395 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MT-CO1P00395 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.25■■□□□ 1.79
MT-CO1P00395 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
MT-CO1P00395 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.24■■□□□ 1.79
MT-CO1P00395 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MT-CO1P00395 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MT-CO1P00395 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MT-CO1P00395 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.23■■□□□ 1.79
MT-CO1P00395 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MT-CO1P00395 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MT-CO1P00395 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
MT-CO1P00395 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
MT-CO1P00395 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
MT-CO1P00395 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.21■■□□□ 1.79
MT-CO1P00395 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MT-CO1P00395 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
MT-CO1P00395 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
MT-CO1P00395 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MT-CO1P00395 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MT-CO1P00395 MIR639-201ENST00000384974 98 ntBASIC26.19■■□□□ 1.78
MT-CO1P00395 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
MT-CO1P00395 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MT-CO1P00395 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.18■■□□□ 1.78
MT-CO1P00395 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.17■■□□□ 1.78
MT-CO1P00395 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
MT-CO1P00395 AL139393.2-201ENST00000608721 2025 ntBASIC26.17■■□□□ 1.78
MT-CO1P00395 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
MT-CO1P00395 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MT-CO1P00395 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MT-CO1P00395 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MT-CO1P00395 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
MT-CO1P00395 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MT-CO1P00395 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
MT-CO1P00395 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
MT-CO1P00395 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.14■■□□□ 1.78
MT-CO1P00395 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
MT-CO1P00395 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
MT-CO1P00395 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.14■■□□□ 1.77
MT-CO1P00395 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MT-CO1P00395 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
MT-CO1P00395 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MT-CO1P00395 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.12■■□□□ 1.77
MT-CO1P00395 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.12■■□□□ 1.77
MT-CO1P00395 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MT-CO1P00395 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.12■■□□□ 1.77
MT-CO1P00395 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MT-CO1P00395 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.1■■□□□ 1.77
MT-CO1P00395 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
MT-CO1P00395 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
MT-CO1P00395 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
MT-CO1P00395 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.09■■□□□ 1.77
MT-CO1P00395 AP004833.2-201ENST00000532228 1454 ntBASIC26.09■■□□□ 1.77
MT-CO1P00395 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.08■■□□□ 1.77
MT-CO1P00395 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MT-CO1P00395 MIR4449-201ENST00000578365 66 ntBASIC26.08■■□□□ 1.77
MT-CO1P00395 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MT-CO1P00395 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MT-CO1P00395 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
MT-CO1P00395 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.07■■□□□ 1.76
MT-CO1P00395 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MT-CO1P00395 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.06■■□□□ 1.76
MT-CO1P00395 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
MT-CO1P00395 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MT-CO1P00395 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.06■■□□□ 1.76
MT-CO1P00395 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-CO1P00395 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-CO1P00395 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-CO1P00395 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.05■■□□□ 1.76
MT-CO1P00395 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
MT-CO1P00395 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
MT-CO1P00395 AC100797.4-201ENST00000631653 1827 ntBASIC26.04■■□□□ 1.76
MT-CO1P00395 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms