Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LSM8O95777 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
LSM8O95777 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
LSM8O95777 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LSM8O95777 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
LSM8O95777 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSM8O95777 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSM8O95777 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSM8O95777 RPS2P35-201ENST00000443417 897 ntBASIC27.18■■□□□ 1.94
LSM8O95777 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
LSM8O95777 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.18■■□□□ 1.94
LSM8O95777 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.18■■□□□ 1.94
LSM8O95777 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.18■■□□□ 1.94
LSM8O95777 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.17■■□□□ 1.94
LSM8O95777 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
LSM8O95777 AC100797.4-201ENST00000631653 1827 ntBASIC27.17■■□□□ 1.94
LSM8O95777 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.17■■□□□ 1.94
LSM8O95777 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.16■■□□□ 1.94
LSM8O95777 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.16■■□□□ 1.94
LSM8O95777 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.16■■□□□ 1.94
LSM8O95777 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSM8O95777 WHAMMP2-203ENST00000563942 1603 ntBASIC27.16■■□□□ 1.94
LSM8O95777 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSM8O95777 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSM8O95777 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSM8O95777 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.14■■□□□ 1.94
LSM8O95777 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSM8O95777 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.14■■□□□ 1.93
LSM8O95777 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.13■■□□□ 1.93
LSM8O95777 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LSM8O95777 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
LSM8O95777 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.12■■□□□ 1.93
LSM8O95777 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
LSM8O95777 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LSM8O95777 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.11■■□□□ 1.93
LSM8O95777 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
LSM8O95777 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
LSM8O95777 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.1■■□□□ 1.93
LSM8O95777 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.1■■□□□ 1.93
LSM8O95777 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.1■■□□□ 1.93
LSM8O95777 AC021231.2-201ENST00000594613 730 ntBASIC27.09■■□□□ 1.93
LSM8O95777 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.09■■□□□ 1.93
LSM8O95777 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LSM8O95777 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LSM8O95777 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.08■■□□□ 1.93
LSM8O95777 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.08■■□□□ 1.93
LSM8O95777 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LSM8O95777 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LSM8O95777 DUX4L29-201ENST00000425409 679 ntBASIC27.08■■□□□ 1.93
LSM8O95777 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
LSM8O95777 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LSM8O95777 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LSM8O95777 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
LSM8O95777 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.07■■□□□ 1.92
LSM8O95777 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.07■■□□□ 1.92
LSM8O95777 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LSM8O95777 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.07■■□□□ 1.92
LSM8O95777 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
LSM8O95777 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
LSM8O95777 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
LSM8O95777 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LSM8O95777 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LSM8O95777 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LSM8O95777 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LSM8O95777 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LSM8O95777 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
LSM8O95777 AP002414.2-202ENST00000590929 1450 ntBASIC27.02■■□□□ 1.92
LSM8O95777 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.01■■□□□ 1.91
LSM8O95777 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
LSM8O95777 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
LSM8O95777 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
LSM8O95777 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.01■■□□□ 1.91
LSM8O95777 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
LSM8O95777 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LSM8O95777 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LSM8O95777 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.98■■□□□ 1.91
LSM8O95777 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
LSM8O95777 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.97■■□□□ 1.91
LSM8O95777 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LSM8O95777 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LSM8O95777 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LSM8O95777 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
LSM8O95777 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LSM8O95777 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
LSM8O95777 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.96■■□□□ 1.91
LSM8O95777 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
LSM8O95777 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
LSM8O95777 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.95■■□□□ 1.9
LSM8O95777 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
LSM8O95777 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.95■■□□□ 1.9
LSM8O95777 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LSM8O95777 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.94■■□□□ 1.9
LSM8O95777 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
LSM8O95777 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.93■■□□□ 1.9
LSM8O95777 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms