Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSSCA1O60232 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.8■□□□□ 0.92
SSSCA1O60232 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.8■□□□□ 0.92
SSSCA1O60232 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSSCA1O60232 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
SSSCA1O60232 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSSCA1O60232 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSSCA1O60232 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSSCA1O60232 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.78■□□□□ 0.92
SSSCA1O60232 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.78■□□□□ 0.92
SSSCA1O60232 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.77■□□□□ 0.92
SSSCA1O60232 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.77■□□□□ 0.92
SSSCA1O60232 LINC01003-201ENST00000564834 1764 ntBASIC20.77■□□□□ 0.92
SSSCA1O60232 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.77■□□□□ 0.92
SSSCA1O60232 AL449106.1-201ENST00000608517 1980 ntBASIC20.77■□□□□ 0.92
SSSCA1O60232 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSSCA1O60232 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.77■□□□□ 0.91
SSSCA1O60232 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSSCA1O60232 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.76■□□□□ 0.91
SSSCA1O60232 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
SSSCA1O60232 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSSCA1O60232 AP004833.2-201ENST00000532228 1454 ntBASIC20.75■□□□□ 0.91
SSSCA1O60232 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SSSCA1O60232 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSSCA1O60232 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
SSSCA1O60232 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SSSCA1O60232 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSSCA1O60232 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
SSSCA1O60232 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSSCA1O60232 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SSSCA1O60232 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSSCA1O60232 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SSSCA1O60232 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSSCA1O60232 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 AP002365.1-201ENST00000603448 772 ntBASIC20.69■□□□□ 0.9
SSSCA1O60232 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSSCA1O60232 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SSSCA1O60232 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSSCA1O60232 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSSCA1O60232 AL133380.1-201ENST00000506013 324 ntBASIC20.68■□□□□ 0.9
SSSCA1O60232 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SSSCA1O60232 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSSCA1O60232 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
SSSCA1O60232 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSSCA1O60232 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSSCA1O60232 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.66■□□□□ 0.9
SSSCA1O60232 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSSCA1O60232 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.65■□□□□ 0.9
SSSCA1O60232 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.65■□□□□ 0.9
SSSCA1O60232 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSSCA1O60232 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SSSCA1O60232 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSSCA1O60232 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSSCA1O60232 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.64■□□□□ 0.89
SSSCA1O60232 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSSCA1O60232 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSSCA1O60232 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.62■□□□□ 0.89
SSSCA1O60232 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSSCA1O60232 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SSSCA1O60232 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.61■□□□□ 0.89
SSSCA1O60232 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSSCA1O60232 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.61■□□□□ 0.89
SSSCA1O60232 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms