Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK2O00526 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK2O00526 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK2O00526 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK2O00526 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.56■□□□□ 0.88
UPK2O00526 BX255925.1-201ENST00000566954 1854 ntBASIC20.56■□□□□ 0.88
UPK2O00526 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.55■□□□□ 0.88
UPK2O00526 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK2O00526 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK2O00526 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPK2O00526 SUZ12P1-203ENST00000578195 985 ntBASIC20.55■□□□□ 0.88
UPK2O00526 AC005559.1-201ENST00000589661 871 ntBASIC20.55■□□□□ 0.88
UPK2O00526 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UPK2O00526 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.55■□□□□ 0.88
UPK2O00526 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK2O00526 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPK2O00526 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK2O00526 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
UPK2O00526 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.54■□□□□ 0.88
UPK2O00526 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UPK2O00526 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.53■□□□□ 0.88
UPK2O00526 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK2O00526 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.53■□□□□ 0.88
UPK2O00526 AC100797.4-201ENST00000631653 1827 ntBASIC20.53■□□□□ 0.88
UPK2O00526 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK2O00526 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UPK2O00526 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK2O00526 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK2O00526 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK2O00526 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK2O00526 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UPK2O00526 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK2O00526 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.51■□□□□ 0.87
UPK2O00526 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UPK2O00526 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.5■□□□□ 0.87
UPK2O00526 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPK2O00526 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK2O00526 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
UPK2O00526 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPK2O00526 AL121749.1-202ENST00000609313 2153 ntBASIC20.5■□□□□ 0.87
UPK2O00526 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK2O00526 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK2O00526 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPK2O00526 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK2O00526 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
UPK2O00526 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
UPK2O00526 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK2O00526 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK2O00526 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.48■□□□□ 0.87
UPK2O00526 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK2O00526 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPK2O00526 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UPK2O00526 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UPK2O00526 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK2O00526 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.47■□□□□ 0.87
UPK2O00526 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK2O00526 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK2O00526 AC108673.1-201ENST00000510422 1159 ntBASIC20.46■□□□□ 0.87
UPK2O00526 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK2O00526 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.46■□□□□ 0.87
UPK2O00526 LINC01003-201ENST00000564834 1764 ntBASIC20.46■□□□□ 0.87
UPK2O00526 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK2O00526 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
UPK2O00526 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPK2O00526 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK2O00526 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK2O00526 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
UPK2O00526 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK2O00526 AP002414.2-202ENST00000590929 1450 ntBASIC20.44■□□□□ 0.86
UPK2O00526 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK2O00526 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.43■□□□□ 0.86
UPK2O00526 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.43■□□□□ 0.86
UPK2O00526 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UPK2O00526 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK2O00526 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.43■□□□□ 0.86
UPK2O00526 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK2O00526 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK2O00526 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.42■□□□□ 0.86
UPK2O00526 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK2O00526 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPK2O00526 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.41■□□□□ 0.86
UPK2O00526 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK2O00526 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK2O00526 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK2O00526 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK2O00526 AC135983.2-203ENST00000454486 1613 ntBASIC20.41■□□□□ 0.86
UPK2O00526 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.41■□□□□ 0.86
UPK2O00526 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK2O00526 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
UPK2O00526 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK2O00526 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPK2O00526 MIR6090-201ENST00000622481 60 ntBASIC20.4■□□□□ 0.86
UPK2O00526 DUX4L28-201ENST00000623687 678 ntBASIC20.4■□□□□ 0.86
UPK2O00526 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPK2O00526 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPK2O00526 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.39■□□□□ 0.86
UPK2O00526 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.39■□□□□ 0.86
UPK2O00526 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPK2O00526 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.39■□□□□ 0.85
UPK2O00526 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms