Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LINC00273-201ENST00000539813 1452 ntBASIC24.47■■□□□ 1.51
RTCAO00442 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTCAO00442 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTCAO00442 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
RTCAO00442 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTCAO00442 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
RTCAO00442 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RTCAO00442 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RTCAO00442 DUX4L29-201ENST00000425409 679 ntBASIC24.45■■□□□ 1.5
RTCAO00442 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTCAO00442 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTCAO00442 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTCAO00442 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCAO00442 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCAO00442 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.44■■□□□ 1.5
RTCAO00442 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCAO00442 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.43■■□□□ 1.5
RTCAO00442 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCAO00442 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.43■■□□□ 1.5
RTCAO00442 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCAO00442 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RTCAO00442 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCAO00442 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RTCAO00442 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCAO00442 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCAO00442 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCAO00442 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCAO00442 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCAO00442 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCAO00442 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
RTCAO00442 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RTCAO00442 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RTCAO00442 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.41■■□□□ 1.5
RTCAO00442 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RTCAO00442 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTCAO00442 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.4■■□□□ 1.5
RTCAO00442 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.4■■□□□ 1.5
RTCAO00442 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTCAO00442 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.4■■□□□ 1.5
RTCAO00442 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTCAO00442 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTCAO00442 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTCAO00442 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.39■■□□□ 1.5
RTCAO00442 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTCAO00442 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.39■■□□□ 1.5
RTCAO00442 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.39■■□□□ 1.49
RTCAO00442 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCAO00442 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCAO00442 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.39■■□□□ 1.49
RTCAO00442 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RTCAO00442 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCAO00442 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.38■■□□□ 1.49
RTCAO00442 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.38■■□□□ 1.49
RTCAO00442 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCAO00442 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.38■■□□□ 1.49
RTCAO00442 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.38■■□□□ 1.49
RTCAO00442 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.38■■□□□ 1.49
RTCAO00442 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCAO00442 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
RTCAO00442 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RTCAO00442 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.37■■□□□ 1.49
RTCAO00442 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.36■■□□□ 1.49
RTCAO00442 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCAO00442 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTCAO00442 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.36■■□□□ 1.49
RTCAO00442 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.36■■□□□ 1.49
RTCAO00442 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCAO00442 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCAO00442 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCAO00442 AC142086.6-201ENST00000621154 1765 ntBASIC24.35■■□□□ 1.49
RTCAO00442 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.35■■□□□ 1.49
RTCAO00442 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RTCAO00442 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCAO00442 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.34■■□□□ 1.49
RTCAO00442 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.34■■□□□ 1.49
RTCAO00442 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RTCAO00442 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
RTCAO00442 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RTCAO00442 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.33■■□□□ 1.49
RTCAO00442 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.33■■□□□ 1.49
RTCAO00442 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.32■■□□□ 1.48
RTCAO00442 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTCAO00442 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTCAO00442 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.31■■□□□ 1.48
RTCAO00442 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.31■■□□□ 1.48
RTCAO00442 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTCAO00442 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTCAO00442 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RTCAO00442 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTCAO00442 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTCAO00442 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.29■■□□□ 1.48
RTCAO00442 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTCAO00442 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RTCAO00442 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCAO00442 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCAO00442 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCAO00442 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTCAO00442 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTCAO00442 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTCAO00442 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms