Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHKB-CPT1BH3BT56 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHKB-CPT1BH3BT56 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHKB-CPT1BH3BT56 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHKB-CPT1BH3BT56 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHKB-CPT1BH3BT56 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHKB-CPT1BH3BT56 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.52□□□□□ -0.08
CHKB-CPT1BH3BT56 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHKB-CPT1BH3BT56 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHKB-CPT1BH3BT56 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHKB-CPT1BH3BT56 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHKB-CPT1BH3BT56 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHKB-CPT1BH3BT56 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHKB-CPT1BH3BT56 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.5□□□□□ -0.09
CHKB-CPT1BH3BT56 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHKB-CPT1BH3BT56 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHKB-CPT1BH3BT56 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHKB-CPT1BH3BT56 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHKB-CPT1BH3BT56 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHKB-CPT1BH3BT56 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC14.46□□□□□ -0.09
CHKB-CPT1BH3BT56 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CHKB-CPT1BH3BT56 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CHKB-CPT1BH3BT56 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHKB-CPT1BH3BT56 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHKB-CPT1BH3BT56 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CHKB-CPT1BH3BT56 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHKB-CPT1BH3BT56 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHKB-CPT1BH3BT56 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHKB-CPT1BH3BT56 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms